Protein
View in Explore- Genbank accession
- UUG68469.1 [GenBank]
- Protein name
- tail tubular protein B
- RBP type
-
TSP
- Protein sequence
-
MILEGVYLSFLKGVSQQTPQERSDGQLGAQLNLLSDAVTGLRRRGGVKFQAKLTGIPNSSYIRLIDINGVNYIMIVDTVTGTLKIYNFDGSLLKAHQTDYLKASNGKASIRSTVSRNNCFVLNTEQVITKTPTGGTNPIPNPSTMGYISIRSGQFSKMYSVDIKSGSYTLSFGVGTSGSEAWQATPEWVATEMENRIKEDTTLNARYTVVREGSTVALKAKSATDTNLLVIESGTGSTYIQTSNSSRVQGKQDIIANLPNILDKYIIAVGTVGNSAYYQYNATTSTWKECGVYEAPYKFTNEPIYWYFDDTDTIQVKSLDIQPRTAGDDDNNPLPKFVDFGITGISAYQSRLVLLSGSYVNMSATADFNVYMRTTVEELQDDDPIEVSSTALSAAQFEYAVPYNKDLVLLAQNQQAVIPANSTVLTPKTAVIYPSSKANISMSSEPQVVSRSLYYTYQRGTEYYQVGEMIPNAYSDAQYYAQNLADHIPLYATGVCTSITGSTTDNMAVFSSDKKEVLVHQYLWAGEDRPLMSFHKWELPYDVLHVQFLQEYLVLFMDVGDDLVVGTINVQLNQLDNKPIPFLDIYQYVDIVDGEGVLPAFLPEGELVAAVYSSETMRHAKVQYEIEGTKIKCQFNGRIYLGVPYESSLTLTPPLLRMIKVE
- Physico‐chemical
properties -
protein length: 662 AA molecular weight: 73324,82160 Da isoelectric point: 4,93694 aromaticity: 0,10121 hydropathy: -0,19441
Domains
Domains [InterPro]
DC_0058
STR
1–660
STR
1–660
IPR058003
TTP
9–579
TTP
9–579
1
662
Architecture
STR 1-660 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
662
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 135 | 135 | 0,9764 |
| Central domain | 136 | 339 | 205 | 0,1612 |
| C-terminal | 340 | 662 | 322 | 0,1176 |
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-135
1-135
Central
136-339
136-339
C-terminal
340-662
340-662
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Acinetobacter phage TCUAN2 [NCBI] |
2951244 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
UUG68469.1
[NCBI]
Genbank nucleotide accession
ON531987
[NCBI]
CDS location
range 25955 -> 27943
strand +
strand +
CDS
ATGATTCTTGAGGGAGTGTACCTGTCATTCTTGAAAGGTGTATCACAGCAAACACCTCAAGAGCGTAGTGACGGACAATTAGGCGCACAGCTTAATTTATTATCTGATGCTGTAACAGGTTTACGTAGACGTGGTGGGGTTAAATTCCAAGCTAAGTTGACAGGTATTCCGAATAGCAGTTATATACGTTTAATTGACATCAACGGTGTTAATTATATTATGATCGTAGATACTGTTACAGGTACTTTAAAGATTTATAATTTTGATGGTTCCTTACTTAAAGCACATCAAACAGATTATCTTAAAGCCTCCAACGGTAAGGCTAGTATCCGTAGTACAGTCTCACGTAATAATTGCTTTGTATTAAATACAGAACAAGTTATTACTAAGACACCTACAGGCGGCACTAACCCTATACCTAATCCAAGTACAATGGGTTATATCAGTATTCGTTCTGGTCAGTTCTCTAAGATGTATTCAGTAGACATCAAGTCAGGTTCTTATACCTTAAGTTTTGGTGTGGGTACATCGGGTAGTGAGGCATGGCAGGCTACTCCTGAATGGGTAGCTACTGAGATGGAGAATAGGATTAAAGAGGATACTACACTTAATGCGCGTTATACTGTTGTACGGGAAGGTAGTACGGTTGCACTTAAAGCTAAATCTGCCACAGATACAAACTTGCTAGTGATTGAGTCTGGTACAGGTAGTACTTATATTCAGACGAGTAATTCTAGTCGTGTACAAGGTAAACAGGATATTATTGCTAATCTACCTAATATCTTAGATAAGTATATTATTGCGGTAGGTACAGTAGGTAACTCCGCTTATTACCAATACAACGCTACTACAAGTACTTGGAAAGAATGTGGTGTATATGAGGCTCCATATAAGTTCACTAACGAACCTATTTACTGGTACTTTGATGATACTGATACTATCCAAGTTAAAAGCCTAGATATTCAACCACGTACAGCAGGTGATGATGATAATAACCCACTACCTAAGTTTGTGGATTTTGGTATCACAGGTATTAGTGCTTATCAATCACGTTTAGTACTACTTAGTGGTTCATATGTTAATATGAGTGCTACAGCAGACTTTAATGTCTATATGCGTACTACTGTAGAGGAATTACAGGATGATGACCCTATTGAAGTGTCTAGTACTGCTTTGAGTGCTGCACAGTTTGAATATGCTGTTCCGTACAATAAAGATTTAGTTTTATTGGCGCAGAATCAACAAGCTGTTATCCCAGCTAACAGTACAGTACTTACACCTAAGACGGCTGTTATCTATCCAAGTTCAAAAGCTAACATTAGTATGTCCAGTGAACCGCAGGTTGTATCTCGTAGTTTGTACTACACTTATCAACGTGGTACAGAATATTATCAAGTTGGTGAGATGATTCCTAACGCTTATTCAGATGCACAGTACTATGCACAGAACTTAGCAGACCATATTCCATTATACGCCACAGGTGTTTGTACATCAATCACAGGCAGTACTACAGATAATATGGCTGTATTCAGTTCTGATAAGAAAGAGGTACTTGTACATCAATACCTATGGGCAGGTGAAGATCGTCCATTAATGAGCTTTCATAAATGGGAATTACCTTATGATGTATTACATGTACAATTTCTACAAGAGTATTTAGTGTTGTTTATGGATGTTGGTGATGATCTGGTGGTTGGTACTATTAACGTACAGCTAAACCAGCTAGATAATAAACCTATCCCATTCTTAGACATTTATCAATACGTAGATATTGTAGATGGTGAAGGTGTATTACCTGCGTTCTTACCAGAAGGTGAATTAGTAGCTGCGGTATATAGTTCTGAGACTATGCGTCATGCTAAGGTTCAATATGAAATCGAAGGTACTAAGATTAAGTGTCAGTTTAACGGACGTATTTATCTAGGTGTACCTTATGAAAGTTCACTCACACTAACACCTCCTTTGTTAAGGATGATAAAGGTAGAGTAG
Genome Context
Genome Context
Tertiary structure
PDB ID
5a20412fa604463dae417292bd07f7445f6f8ba0cfe39f3976ad4b60c677b055
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50
Literature
| Title | Authors | Date | PMID | Source |
|---|---|---|---|---|
| Isolation and characterization of bacteriophages with activities against multi-drug-resistant Acinetobacter nosocomialis causing bloodstream infection in vivo | Pekkle Lam,H.Y., Lai,M.J., Wu,W.J., Chin,Y.H., Chao,H.J., Chen,L.K., Peng,S.Y. and Chang,K.C. | 2023 | 37586915 | GenBank |