Protein

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Genbank accession
XYH92034.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,64
Protein sequence
MGLVSQSVKNLKGGISQQPEILRFSNQGSIQINGWSSEAEGLQKRPPTKFVKYLGPDSMWPGKPAIHLINRDRTEQYFVIFTGSGIAVRDLLGNTYTVRGYNGYANCANPRDDLRMVTVADYTFVVNRNRQVTMAGSVTQAGYPRLDGRAIINVRGGQYGRTLKVAINVPIESAQATVALPDGSVAAHVNETDAQVIANKIRDQLNASLGPSGWSAQSGPGWVVINAPANDNIRSIATADGYANQLINGFVYQVQSFSKLPSQCVDGYLVEITGEASRTGDNYWVRYDASGSVWRETVKPGIIAGVDPLSMPHAIIRAADGQFDFTPLSWGTRAAGDDKTNPMPSFTESTINDVFFFRNRLGFLSGENVVMSRTAKYFDFFPASVAELSDDDPIDVAISHNRVSILKYAVPFSEQLLLWSDQAQFVLSSSGVLSPKNIQLDLTTEFDVSDNARPFGIGRGVYFASPRASYTSIKRYYAIQDVSNVKSAEDISAHVPSYIPNTVFSLHGSGTENFLTVLSDSMRSCVFIYKFLYLDEQVVQQSWSHWDMGEGVEVLCAACIGSFMWMILRRPGGITLERVEFTKDTVDYSSEPWRAYMDMKVQVVPTIYNDDEYLTKLDLRTLYGFAPGEGDFWTLSEDGVFRLHEMPAGGWAADPILKVDGNVTGRNFIVGRAYEFTYGFSKFLIKQTADDGSTSTEDIGRLQLRRAWVNYEESGSFQVVVDNGAVQFSYDMAGGRLGSSVAVGEPNAGTGQFKFPITGNAQNQMVYLFSRAPVPVNIIGCGWEGNYLRRSTGV
Physico‐chemical
properties
protein length:794 AA
molecular weight: 87428,20760 Da
isoelectric point:5,31441
aromaticity:0,11209
hydropathy:-0,18992

Domains

Domains [InterPro]
IPR058003
TTP
1–793
IPR058003
XYH92034.1
1 794
Architecture
TTP
TTP 1-793 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYH92034.1
1 794
Domain Start End Length (AA) Confidence
N-terminal 1 142 142 0,9867
Central domain 143 350 209 0,2437
C-terminal 351 794 443 0,1663
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-142
Central
143-350
C-terminal
351-794

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage phTUNSm
[NCBI] 		3425131 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas asplenii
[NCBI] 		53407 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYH92034.1 [NCBI]
Genbank nucleotide accession
PV620261 [NCBI]
CDS location
range 23977 -> 26361
strand +
CDS
ATGGGTCTCGTATCACAGTCGGTCAAGAACCTCAAGGGTGGTATCAGTCAGCAACCGGAGATCCTCCGTTTCTCGAACCAAGGCTCTATCCAGATCAATGGGTGGTCCTCAGAGGCAGAGGGTCTCCAGAAACGTCCGCCTACCAAGTTCGTCAAGTACCTCGGGCCTGACTCCATGTGGCCTGGGAAGCCTGCCATCCACCTAATCAACCGTGACCGCACTGAGCAATACTTTGTGATCTTCACAGGCAGTGGGATTGCCGTAAGGGACCTCCTGGGCAACACCTACACAGTCCGTGGGTACAACGGGTATGCCAACTGTGCGAACCCTCGGGATGACCTACGGATGGTCACTGTGGCTGACTACACGTTCGTAGTGAACCGAAACCGTCAGGTGACTATGGCTGGATCGGTTACACAGGCTGGGTATCCACGTCTGGACGGAAGGGCGATCATCAATGTCCGTGGCGGTCAATACGGGCGAACCTTGAAGGTGGCTATTAACGTCCCTATCGAGTCTGCCCAGGCTACTGTTGCGCTACCAGATGGCTCAGTCGCAGCGCATGTCAACGAAACAGATGCCCAGGTCATCGCCAACAAGATCAGGGACCAACTAAATGCGTCCCTCGGTCCTTCTGGGTGGTCAGCGCAATCTGGTCCAGGGTGGGTGGTCATTAATGCCCCAGCCAACGACAACATCCGGTCTATCGCCACTGCTGATGGCTACGCCAACCAGTTGATTAACGGGTTCGTCTATCAGGTGCAGTCCTTCTCGAAGCTGCCGAGTCAGTGTGTTGACGGATACCTCGTGGAGATCACTGGGGAAGCCTCCAGGACTGGAGACAACTACTGGGTGCGCTATGACGCCTCTGGGTCTGTCTGGAGGGAGACCGTTAAGCCTGGGATCATCGCAGGGGTCGATCCCCTAAGTATGCCTCATGCCATCATCCGGGCTGCCGATGGTCAGTTCGACTTCACACCGCTGTCCTGGGGAACCCGAGCGGCAGGTGACGATAAGACGAACCCAATGCCCAGCTTTACGGAATCCACGATCAACGATGTGTTCTTCTTCCGTAACCGCCTGGGGTTCCTCTCAGGGGAGAACGTGGTGATGAGCCGCACGGCTAAATACTTCGACTTCTTCCCTGCCTCGGTAGCTGAGCTTAGTGATGATGACCCAATCGACGTGGCTATCAGCCATAACCGTGTGTCCATCCTCAAGTACGCTGTGCCCTTCTCGGAGCAGCTCCTATTGTGGAGCGACCAAGCTCAGTTCGTATTGAGCAGCTCTGGGGTCCTGTCGCCTAAGAACATCCAGTTGGACCTCACCACGGAGTTCGATGTTAGCGACAACGCACGTCCTTTCGGTATTGGCCGTGGGGTCTACTTTGCGAGTCCTCGGGCGTCCTACACATCCATCAAGCGGTACTACGCGATCCAAGATGTGAGCAACGTGAAGTCCGCTGAGGACATATCAGCGCACGTCCCGAGCTATATACCCAACACGGTGTTCTCCCTCCACGGGTCAGGCACCGAGAACTTCCTTACGGTCCTCAGTGACTCCATGAGAAGCTGTGTGTTCATCTACAAGTTCCTCTACCTGGACGAACAAGTGGTGCAGCAGTCGTGGAGCCATTGGGACATGGGGGAGGGTGTGGAGGTGCTCTGCGCTGCCTGCATCGGGTCCTTCATGTGGATGATCCTTCGGCGTCCTGGGGGAATCACCCTGGAACGTGTCGAGTTCACAAAGGACACTGTGGACTACAGCAGTGAGCCCTGGCGTGCCTACATGGACATGAAGGTGCAGGTAGTCCCAACGATCTACAACGATGATGAGTACCTGACCAAGCTGGACCTACGGACCCTCTACGGGTTTGCTCCTGGGGAAGGCGACTTCTGGACACTCTCTGAGGACGGTGTGTTCCGTCTCCATGAGATGCCCGCTGGTGGGTGGGCAGCCGACCCCATCTTAAAGGTGGACGGTAACGTGACCGGCAGGAACTTCATCGTCGGGCGTGCCTACGAGTTCACCTACGGGTTCTCGAAGTTCCTCATTAAGCAGACAGCGGACGATGGCTCCACGAGCACTGAGGACATCGGGAGGCTCCAGCTTCGCCGTGCCTGGGTGAACTACGAGGAGTCCGGGTCCTTCCAGGTCGTAGTGGATAACGGAGCGGTTCAGTTCAGCTACGACATGGCGGGTGGACGCCTTGGGTCCTCAGTGGCCGTAGGCGAGCCAAACGCTGGCACTGGGCAGTTCAAGTTCCCAATCACAGGCAATGCTCAGAACCAGATGGTCTACTTGTTCTCCAGGGCTCCAGTCCCAGTGAACATCATCGGGTGCGGCTGGGAGGGTAACTACCTACGCCGATCCACTGGCGTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
45cb76b409768852e06db236c0de511154e743d8a71a9806b16c26139e578d2a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8766
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50