Protein

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Genbank accession
XLZ15526.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPNVRTLQRSFAGGEMSPEMFGRIDDVKYQTGAATMKNFIATPQGPAENRAGFAFVREVKDSTKRTRLIPFTYSTTQTMVIELSPGYIRFHTQGGTLMSGGVPYEIANPYAEADLFDIHYVQSADVMTLVHPNYAPRELRRLGATNWTLTTINFGSPIAAPTGVTATRYIPASSSTNADTYETMSYVVTAITADEIGESVSSSVASVTNNIFVTGATNTISWSAVTGASRYRVYKLLGGLYGYIGSTTTTSIVDNNIAPDLSVTPPIYDNEFVSTGNYPGAVSYFEQRRCFAGTINEPQKIWMTKSGTESNLSYGLPIRDDDRIEFRVAAREANTIRHIVPLTQLLLLTGSAEWRVSSLNSDEITPTTISVRPQSYIGASNVQPVIINNALVYCGARGGHIRELGYNWQASGFITNDLSIRSAHLFDNYEISDMAFAKAPIQMVWFVSTSGMLLGLTYTPEQQVGAWHKHDTDGVFESCTVVAEGNEDRLYVVVKRTINGQTKRYVERMSSRHFDSIEGAFFVDSGATYNGTNTTATTVTVSGGTTWGPADVLTITASSAIFTYPGTSDVNDAIVLTDAAGNKYRLTIRSTTSTTVATARVDVTLPVALRNTATALYSFARNTISGLSWLEGKTVSILADGAVQPRKVVTSGTITIDRASSIIHIGLPYESDLQSLPLAMGIDNGMGQGRYKNVNKAWLRVYQSSGIFIGPNPQNLVEAKQRTTEPYGTPPELKTEEIQIMLTPSWLDSGQVFVRQSDPLPLSIVGMTLEVAIGG
Physico‐chemical
properties
protein length:775 AA
molecular weight: 84232,80470 Da
isoelectric point:5,71103
aromaticity:0,09032
hydropathy:-0,12529

Domains

Domains [InterPro]
DC_0058
STR
1–595
DC_0058 DC_1984
IPR013783
STR
198–268
IPR013783
XLZ15526.1
1 775
Architecture
STR
RBD
STR 1-595 | RBD 609-775
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XLZ15526.1
1 775
Domain Start End Length (AA) Confidence
N-terminal 1 153 153 0,9935
Central domain 154 385 233 0,1980
C-terminal 386 775 389 0,1067
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-153
Central
154-385
C-terminal
386-775

Taxonomy

  Name Taxonomy ID Lineage
Phage Limnohabitans phage DC33
[NCBI] 		3390365 Viruses > Monodnaviria > Loebvirae > Hofneiviricota > Faserviricetes
Host Limnohabitans sp. DCL3
[NCBI] 		3374103 Pseudomonadota > Betaproteobacteria > Burkholderiales > Comamonadaceae > Limnohabitans >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLZ15526.1 [NCBI]
Genbank nucleotide accession
PQ492659 [NCBI]
CDS location
range 34058 -> 36385
strand -
CDS
ATGCCGAATGTGCGCACACTACAACGATCCTTTGCTGGCGGCGAGATGTCGCCAGAAATGTTTGGCCGCATCGATGATGTGAAATACCAGACTGGCGCGGCAACGATGAAGAACTTCATTGCTACGCCACAAGGCCCAGCAGAAAACCGCGCAGGCTTTGCATTTGTCCGCGAGGTCAAAGACAGCACCAAGCGCACTCGGCTGATCCCATTCACATACTCGACCACACAAACCATGGTGATCGAGTTAAGCCCAGGCTACATCCGCTTCCACACACAAGGCGGCACACTGATGTCTGGCGGCGTGCCATACGAGATTGCAAACCCGTACGCAGAAGCAGATCTGTTTGACATCCACTATGTGCAGTCTGCCGATGTGATGACGCTGGTGCATCCAAACTATGCGCCGCGTGAACTGCGTCGCCTGGGTGCAACCAACTGGACGCTCACTACCATCAACTTTGGATCACCGATTGCCGCACCCACTGGTGTGACTGCAACGCGGTACATCCCTGCGTCTTCGTCAACAAACGCAGACACATACGAGACGATGAGTTATGTCGTGACGGCCATCACAGCCGATGAGATTGGCGAGTCCGTCTCATCCAGCGTGGCATCAGTCACCAACAACATTTTTGTCACTGGCGCAACCAATACGATCTCCTGGTCAGCAGTGACAGGCGCATCGCGTTATCGCGTCTACAAACTGTTGGGAGGCTTGTATGGGTACATTGGAAGCACGACAACCACGAGCATTGTTGACAACAACATCGCGCCAGATCTGTCGGTTACTCCACCCATCTACGACAACGAGTTCGTCAGTACAGGCAACTACCCAGGCGCCGTTTCGTACTTCGAACAGCGTCGCTGTTTTGCTGGCACCATCAACGAGCCGCAAAAAATCTGGATGACCAAGTCAGGCACTGAGTCCAACCTCAGTTATGGCCTGCCGATCCGTGATGACGATCGCATTGAGTTCCGTGTTGCCGCTCGCGAAGCCAACACCATTCGACACATTGTGCCGCTGACCCAGTTGCTGTTGCTGACTGGATCTGCTGAGTGGCGCGTGTCATCGCTCAACAGCGACGAGATCACGCCGACCACAATCTCTGTGCGACCACAGTCGTACATCGGTGCATCGAATGTCCAGCCGGTCATCATCAACAACGCCCTGGTCTATTGCGGAGCACGCGGTGGCCACATCCGTGAACTTGGCTACAACTGGCAGGCCAGCGGCTTTATCACCAACGACTTGTCTATTCGCTCTGCGCACCTGTTTGACAACTACGAGATCAGCGACATGGCATTTGCCAAAGCGCCGATCCAGATGGTTTGGTTCGTGTCGACTTCAGGCATGTTGCTTGGATTGACCTACACACCAGAGCAACAAGTTGGCGCATGGCACAAGCACGACACCGACGGCGTATTTGAGTCCTGCACCGTGGTGGCTGAAGGCAACGAGGACCGGTTGTATGTCGTCGTCAAGCGCACCATCAATGGCCAGACCAAACGCTATGTCGAGCGCATGTCCAGCCGTCACTTTGATTCCATCGAGGGCGCGTTCTTTGTTGACTCTGGCGCAACCTATAACGGCACCAACACCACGGCCACAACGGTCACAGTGAGCGGTGGCACGACCTGGGGTCCAGCCGATGTCCTGACAATCACAGCATCGAGCGCGATCTTTACTTATCCAGGCACCAGTGATGTCAACGATGCCATTGTGCTGACTGACGCCGCTGGCAACAAATACCGCCTCACAATTCGCTCCACGACCTCCACAACGGTCGCAACGGCTCGAGTTGATGTGACGCTACCAGTTGCCCTTAGAAACACCGCCACGGCCCTGTATTCGTTTGCACGCAACACAATCAGTGGACTGTCCTGGCTTGAGGGCAAGACCGTATCGATCCTGGCCGACGGCGCGGTGCAACCACGCAAGGTGGTGACCAGTGGCACGATCACGATTGACCGGGCCTCAAGCATCATCCACATTGGCCTGCCATACGAGTCTGACCTGCAAAGCCTGCCGCTGGCCATGGGCATCGACAACGGCATGGGCCAAGGGCGCTACAAGAATGTCAACAAAGCGTGGCTCCGCGTGTACCAGTCTTCCGGCATCTTCATTGGTCCAAACCCGCAAAACCTGGTTGAGGCCAAGCAACGGACGACTGAGCCATACGGCACTCCGCCTGAGTTGAAGACCGAAGAAATCCAGATCATGCTGACACCATCATGGCTCGATAGTGGCCAGGTGTTCGTCAGACAGTCTGATCCATTGCCTCTGTCCATCGTCGGCATGACCCTTGAGGTTGCGATCGGTGGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c62eb75d71e3b39bb2ade62d33884e5774f02725449ea30b8257d889d7fcb77f
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3017
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50