Protein

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UniProt accession
A0A8S5VPF3 [UniProt]
Protein name
Nucleoid-associated protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MTLHEVQLKGYSVRPGNLSLGTFGSYGIEQLHVTFDDMWSGLAVTATFNPPKGEPFEIRVPENGLIDVPAEVTANAGTGTIVYCGVANGVQRITKTQGYNVITRGNVGGTAPFKPSESLATQVLQAALNAEKNSAEAKSVADDLRNDAANGKFDGKDGAKGDKGDTGPRGPVGPQGPQGEKGVQGPPGATGATGPRGPRGDKGDTGERGPQGEQGVQGVQGEKGDTGAQGPVGETGPVGPKGDTGPQGERGEQGPQ
Physico‐chemical
properties
protein length:256 AA
molecular weight: 25939,12040 Da
isoelectric point:5,08302
aromaticity:0,04297
hydropathy:-0,70000

Domains

Domains [InterPro]
DC_0620
STR
3–226
DC_0620
Coil
Unmapped
127–147
Coil IPR050149
IPR008160
STR
200–255
IPR008160
DC_2050
STR
215–256
DC_2050
A0A8S5VPF3
1 256
Architecture
STR
STR 3-256
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Ackermannviridae sp
[NCBI] 		2831612 Uroviricota > Caudoviricetes > Pantevenvirales >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAG94362.1 [NCBI]
Genbank nucleotide accession
BK035339 [NCBI]
CDS location
range 1 -> 769
strand -
CDS
ATGACATTGCATGAAGTACAGCTGAAAGGGTACAGTGTTCGACCCGGAAACTTATCGCTTGGCACTTTTGGCAGTTACGGTATCGAGCAGCTACATGTGACCTTTGACGATATGTGGAGCGGGCTTGCTGTAACGGCAACGTTTAACCCGCCGAAGGGAGAACCCTTTGAAATACGTGTGCCGGAAAACGGCCTGATTGATGTGCCTGCCGAAGTAACTGCCAATGCGGGTACGGGCACTATCGTGTATTGCGGCGTTGCCAATGGTGTGCAGCGCATCACAAAAACGCAGGGATACAACGTGATTACGCGCGGAAACGTTGGTGGAACTGCACCGTTTAAACCCAGCGAATCGCTTGCCACGCAGGTTTTGCAGGCTGCACTTAACGCAGAAAAGAACAGCGCGGAAGCAAAGAGTGTGGCCGATGACCTACGGAATGATGCGGCTAACGGCAAATTTGACGGAAAGGATGGAGCCAAAGGCGACAAGGGTGATACTGGCCCGCGAGGCCCCGTAGGCCCGCAGGGGCCGCAAGGAGAAAAGGGAGTTCAAGGCCCTCCCGGGGCAACGGGTGCAACTGGCCCGCGCGGGCCACGGGGTGATAAGGGCGACACCGGAGAGCGCGGCCCCCAAGGTGAGCAGGGCGTTCAGGGTGTACAAGGCGAGAAGGGCGATACCGGCGCGCAGGGGCCTGTTGGCGAAACTGGCCCGGTTGGCCCCAAGGGTGATACTGGCCCGCAGGGTGAGCGCGGTGAGCAGGGGCCGCAGG

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0031012 extracellular matrix Cellular Component IEA:TreeGrafter (UniProt)
GO:0005615 extracellular space Cellular Component IEA:TreeGrafter (UniProt)
GO:0030020 extracellular matrix structural constituent conferring tensile strength Molecular Function IEA:TreeGrafter (UniProt)
GO:0030198 extracellular matrix organization Biological Process IEA:TreeGrafter (UniProt)

Tertiary structure

PDB ID
3ee2354bd03158d5b5e79548b0ac9495d21b3f392635a2e5d1ce40c26747acab
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7002
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50