Protein

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Genbank accession
AUR97906.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,51
Protein sequence
MSEIKKPLYTANGLLVDGDSVHNGNVEINKKLSFGADGKLVLLRHANATGIQDECRVNSNTGDLEVFDDGNWANAFTGGLKWTPSESQFTIKRRTDDKNLTVPHIDDTTSILQNVPYYQAEQSGNSSKPSYGRSGSTHAGDGMYFINDGVAFSGAGQTLIESDTTSFRVKFNGSNKLVVNANGVVSKVSVVLEDTLQVDEETTFKKGVVVETGDLDISSGRLLSGGNVVGFSDERIKSKFQRIENALKRILSMEGGIYHNLVTGGKETGLKAQQVRSAISEAVVATGKDVTLLNGDEIENVLAVAYGNLAGLWVEGFREIDDRLAKLEALCLKELDR
Physico‐chemical
properties
protein length:337 AA
molecular weight: 36397,21850 Da
isoelectric point:5,13304
aromaticity:0,06528
hydropathy:-0,31632

Domains

Domains [InterPro]
DC_0421
STR
4–336
DC_0421
IPR030392
CHP
232–331
IPR030392
IPR030392
CHP
232–283
IPR030392
AUR97906.1
1 337
Architecture
STR
STR 4-336 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR97906.1
1 337
Domain Start End Length (AA) Confidence
N-terminal 1 62 62 0,4057
Central domain 63 261 200 0,0929
C-terminal 262 337 75 0,9988
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-62
Central
63-261
C-terminal
262-337

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.244.A._10N.261.54.C3
[NCBI] 		1881412 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio sp.
[NCBI] 		678 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR97906.1 [NCBI]
Genbank nucleotide accession
MG592609.1 [NCBI]
CDS location
range 148841 -> 149854
strand +
CDS
ATGTCTGAAATTAAGAAGCCGCTTTATACGGCCAACGGTCTGTTGGTAGACGGCGACTCAGTACATAACGGTAACGTGGAGATAAACAAAAAGCTATCTTTTGGTGCTGATGGTAAATTAGTATTGCTTAGACACGCCAACGCTACGGGTATTCAAGATGAATGTCGCGTCAACTCCAATACAGGTGACTTGGAAGTTTTTGACGACGGTAATTGGGCTAACGCCTTTACAGGCGGTTTGAAGTGGACGCCGTCAGAGTCGCAATTCACAATAAAGCGAAGGACCGATGACAAGAACCTAACAGTACCTCATATTGATGATACAACTTCAATTTTACAGAACGTTCCTTACTACCAAGCTGAACAATCTGGTAATAGTTCTAAACCATCATACGGTAGGTCGGGTTCTACCCACGCTGGTGATGGTATGTATTTCATCAATGATGGTGTAGCTTTTTCTGGGGCTGGCCAAACATTGATTGAGTCAGATACTACGTCGTTCAGGGTCAAATTCAACGGGTCTAATAAACTCGTAGTCAACGCCAACGGCGTAGTGTCTAAAGTTTCTGTTGTATTGGAAGACACCTTACAGGTAGATGAAGAGACAACTTTCAAGAAAGGCGTGGTAGTTGAAACAGGTGATCTTGATATTTCTTCCGGTAGGTTGTTATCCGGCGGTAACGTTGTAGGTTTCTCAGACGAAAGGATCAAGTCAAAATTCCAACGTATAGAGAACGCCCTCAAACGCATTCTAAGCATGGAAGGTGGAATCTACCACAATCTTGTAACTGGCGGTAAAGAGACTGGTCTGAAGGCACAACAGGTACGCTCAGCCATATCCGAAGCTGTTGTAGCAACAGGCAAAGACGTCACCTTACTAAATGGCGATGAAATAGAAAACGTGTTGGCTGTTGCTTACGGTAACCTTGCTGGTTTGTGGGTGGAGGGTTTCCGTGAAATTGACGATCGTCTTGCAAAATTGGAGGCGTTATGCTTAAAAGAACTGGACCGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
12e1be82e0f5384e6069f271111ed245bc240fe4650b1a93b0c296b91763d559
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7097
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank