Protein

View in Explore
Genbank accession
AUR89758.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSCSDFPTIQTAKTYKLDAETTNEVITLESDRTSEASDGKTKKTFWGIEKDATNQLADIQQRADDQYSDINNQYVLRNKGDYSTDPLLEFYYEFADFNGLIYFPIIAPYQVDSATYPDPSNDPNLRLGQATDDSLVTATGSTTPRRLDDRFADVVNVKDFGAAGDGVTDDTAAIQASFTSSNGRRVCAEGEFFVSSEIQTNGVPFDFSQATLIMSGSGIGNGGTCLRINEPNTQVISNVSSTITKGQGFNDDFRVYGYSSIGIETTEVAYNRNDGSTSNKTDILVSTNGYFRATPALYDISTPMTLTIRPMDIPVIECQLPTFAFKDAPVAEVQACVVVERNNVTLVGGACSARDLAITEGRQILRAFARGDFCANLTCRDFKTALSSLDFCYQVVTMASYKLNVDSCYDISGWALVDGNFMRDTLVTNCTGTRIGNHAMAHNFTAMDCAITEKGIAVSGEGRLVLHNITFGIMEGNLGEIIRSRADYGQAWNGDIDINGIHVTNTSETVGSITLCKMYASFEGEDLTADAHAGRDINISNVMVENYATSQVSMVVYNIASNFTQTVVPPRTINISKIDFTGDIRPLYSGLGGFTDANVAETTTTFNVRSCRNPTGLSSLFLQIPDEDKPNVRNTVVRNYYNHIELDLTLSLPDGWEVNAYDCVIDKIDAASGSFNDEARYILSNCKVLGAHCRTDGGSMRMYGCEFTGPTINFSTGNVLSSGCVADTSTTIVGGGSGISSGAELWSHSSGFKA
Physico‐chemical
properties
protein length:754 AA
molecular weight: 81695,80350 Da
isoelectric point:4,53606
aromaticity:0,08886
hydropathy:-0,20212

Domains

Domains [InterPro]
DC_0489
STR
1–752
DC_0489
IPR012334
STR
130–296
IPR012334
IPR011050
STR
152–547
IPR011050
IPR024535
ENZ
155–199
IPR024535
AUR89758.1
1 754
Architecture
STR
STR 1-752 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR89758.1
1 754
Domain Start End Length (AA) Confidence
N-terminal 1 171 171 0,9871
Central domain 172 733 563 0,9808
C-terminal 734 754 20 0,7537
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-171
Central
172-733
C-terminal
734-754

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.132.O._10N.222.49.F8
[NCBI] 		1881201 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio breoganii
[NCBI] 		553239 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR89758.1 [NCBI]
Genbank nucleotide accession
MG592503.1 [NCBI]
CDS location
range 16528 -> 18792
strand +
CDS
ATGAGTTGTTCAGATTTCCCAACAATACAAACGGCAAAGACGTACAAGCTCGACGCCGAAACCACAAATGAAGTCATTACATTAGAGAGTGACCGCACATCAGAAGCCAGTGACGGGAAAACCAAAAAGACATTTTGGGGCATTGAGAAAGATGCAACAAATCAACTTGCAGATATTCAGCAGCGAGCGGATGATCAATACTCAGATATCAATAATCAGTATGTTCTGCGCAACAAAGGCGATTACTCAACAGACCCGCTGCTAGAGTTTTACTATGAGTTTGCTGACTTCAATGGGTTGATTTACTTCCCTATTATTGCGCCGTATCAAGTGGACAGCGCAACATATCCAGACCCATCAAACGACCCCAACCTGCGATTAGGGCAAGCAACGGATGACAGTTTAGTCACCGCGACAGGCAGTACAACACCTAGACGTTTAGATGATAGGTTTGCTGATGTAGTGAATGTCAAAGATTTTGGTGCCGCAGGGGATGGGGTTACTGATGATACTGCAGCTATTCAGGCTTCTTTCACGAGTTCTAATGGCAGAAGGGTATGTGCAGAAGGGGAGTTCTTCGTGTCGTCTGAAATACAAACAAATGGAGTTCCTTTTGATTTCTCGCAAGCAACATTAATAATGTCTGGCTCAGGTATCGGTAATGGTGGAACATGCCTGCGCATCAATGAACCTAACACTCAAGTAATATCAAATGTCAGCTCTACTATCACGAAAGGTCAAGGTTTCAATGATGACTTCCGAGTATACGGATATTCGAGTATAGGCATAGAAACCACAGAGGTAGCTTATAATCGAAATGACGGTTCAACATCCAATAAGACTGATATCTTAGTAAGCACTAACGGCTATTTCCGAGCAACGCCTGCATTATATGATATATCGACACCTATGACTCTCACTATCAGGCCAATGGATATTCCAGTTATTGAATGTCAATTGCCTACCTTTGCATTTAAAGATGCTCCTGTAGCTGAGGTGCAAGCCTGCGTAGTAGTGGAGAGAAATAATGTAACTCTAGTGGGGGGGGCTTGTTCAGCAAGAGATCTAGCCATTACTGAAGGTCGTCAAATACTACGAGCATTCGCAAGGGGTGATTTCTGCGCTAACTTAACATGTAGAGACTTCAAAACTGCGTTATCCAGTTTAGATTTTTGTTATCAGGTAGTAACTATGGCATCCTACAAGCTCAACGTTGACTCGTGCTATGACATATCAGGGTGGGCATTGGTGGATGGTAACTTTATGCGAGATACATTGGTCACAAACTGCACAGGAACACGCATAGGAAATCACGCGATGGCACACAACTTCACTGCAATGGATTGCGCTATTACTGAAAAAGGTATTGCTGTGAGCGGTGAAGGTCGTCTGGTTCTGCATAATATTACCTTTGGTATTATGGAAGGTAATTTAGGGGAGATTATTAGATCTCGTGCTGACTATGGGCAGGCGTGGAACGGTGATATTGACATTAATGGAATTCATGTAACTAACACATCGGAAACTGTAGGTAGTATTACACTATGTAAAATGTATGCGTCATTCGAAGGTGAGGATTTAACGGCTGATGCGCATGCAGGTAGAGACATTAACATAAGTAATGTAATGGTTGAGAATTATGCTACATCACAAGTATCCATGGTTGTATATAATATTGCCTCTAACTTTACTCAAACTGTCGTGCCTCCTAGAACAATTAACATAAGCAAGATTGACTTTACAGGAGATATAAGACCCCTGTATTCCGGTTTAGGTGGGTTCACTGACGCAAATGTTGCAGAGACTACAACTACATTTAATGTTCGGTCTTGTCGTAACCCAACAGGTCTTAGCTCTCTATTCCTACAAATACCAGATGAAGACAAACCAAATGTACGCAATACTGTTGTCAGGAACTACTATAACCATATCGAGCTGGATTTAACTTTGTCGTTACCGGATGGTTGGGAAGTAAATGCATATGATTGCGTGATAGACAAGATTGACGCAGCGTCTGGGTCTTTTAATGACGAGGCTAGATATATTTTGAGTAACTGTAAAGTACTAGGCGCACATTGTAGAACCGATGGTGGGTCTATGCGCATGTATGGCTGTGAATTCACAGGCCCTACTATTAACTTTTCTACTGGCAATGTTTTAAGCTCAGGATGCGTTGCGGACACCTCCACCACTATTGTCGGCGGAGGTTCTGGGATTAGCTCCGGAGCGGAGTTGTGGAGCCACAGCAGCGGATTTAAGGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
41a308381c1c9a213be667bb5bbc0bc7cf4c3548f02a67c7691befde37e04c49
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6802
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank