Protein

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Genbank accession
AUR87341.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MPTPSGLVTKQELIDAQLDTAHLGRVVNSKDASGNPINTSMNRTGGVNKTLDALEAEYEQSVRDQFNQFETTFGSQFTYKLIGDISDYEGQSLPEDDKLNAYQYPDDSGAWYAPIQSQAFPITIPTDPTVPGGGWALVNSTSQKWVSDNFSNPNLLADRNPNFLIQTSDESQPLPSATPTSYPPGYQIFSGVFADESLGVTGLTYTNGRPHWTSGNLYLSVPNAGAIANLTSDQLTASVADFDGKPRTRGVSFALVGDEYHVTIGVDALEDVATNETPLASVKFEEGSVATRHSSSTDAGLTDDLVSRASSLTEERRIQSPTGVNVLQDQFFTDSKNPTFPIDFYGDGSSTITLSESEAYAAFDVGVDQVAPDLFRRDYHKYKGLFFTGGENADYGITLRPYTGSQSLFEDLTFMGFGNKDSWCLNFQAQNRWPIIDKFSLSDQGEHINGIKAIDDDTRVIAQGSGNSRVIIDKPRIRYLNGREADTTGIKMAATSAIVHLSAIENASKGLQFHYPSNAAKLQNGYFEQAGSPSGTKSIVIGDDNIVPNNFFFNLYIKDVYSNLHAGNGKFIVMGNASANFRDLVLDGLNIAQTAGQPLIEPNDIPAQSAYVGYVSSGGKTAVLPKEPKSNPVHIVDTYNREWKVINGNGQSSKLSGESKVLPQNAGSILADFWSYVGDISGNYFKRVVTGAERTLLRGATTAVRIASPGAGTYSTITYTIPDISEHAGIDNIIQLFARAEGGTTKTFRVSVKLSTGVTHVLSTTTDDVPQDWTEITVPFFFTNYNDLDDDAIIILEIYGGSLTTQLELTGVRAYEGNTGLCTSNAKSPTEQSMSANPWFYKTKVTIPSGAVNFIVGFDTPVRNLGTITETILLIIDGGSTVAGTLAADGLSASFNVTTGNTAVRTATVSLYHGGS
Physico‐chemical
properties
protein length:916 AA
molecular weight: 98643,90070 Da
isoelectric point:4,71016
aromaticity:0,09498
hydropathy:-0,27500

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR87341.1
1 916
Domain Start End Length (AA) Confidence
N-terminal 1 301 301 0,8275
Central domain 302 610 310 0,9813
C-terminal 611 916 305 0,9462
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-301
Central
302-610
C-terminal
611-916

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.098.O._10N.286.51.B9
[NCBI] 		1881321 No lineage information
Host Vibrio lentus
[NCBI] 		136468 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR87341.1 [NCBI]
Genbank nucleotide accession
MG592471.1 [NCBI]
CDS location
range 57099 -> 59849
strand +
CDS
ATGCCAACACCGTCAGGTCTCGTGACCAAACAAGAACTAATCGACGCACAACTCGACACGGCACACTTAGGTCGTGTCGTCAATTCTAAGGACGCTTCAGGTAATCCTATCAACACCTCTATGAACCGTACAGGCGGAGTGAATAAAACACTCGACGCGCTTGAGGCTGAATACGAACAGTCTGTTAGAGACCAGTTTAACCAGTTTGAAACGACGTTTGGTTCTCAGTTCACGTACAAGCTTATCGGCGACATATCAGACTATGAGGGTCAATCACTACCGGAAGACGATAAACTTAACGCATACCAGTACCCCGATGACTCTGGTGCGTGGTATGCGCCAATACAGAGTCAGGCGTTCCCTATCACAATCCCCACGGACCCTACTGTTCCAGGAGGCGGGTGGGCTTTAGTTAATTCTACAAGTCAAAAGTGGGTTTCTGATAACTTTAGTAACCCAAACCTGTTAGCAGACCGCAACCCTAACTTTCTAATCCAAACCTCGGACGAATCTCAGCCGTTACCAAGCGCTACGCCAACAAGTTACCCGCCGGGTTATCAAATCTTTTCTGGTGTTTTTGCTGATGAGTCTCTAGGGGTTACAGGGTTGACTTACACCAATGGTCGTCCGCACTGGACTAGCGGTAATTTGTACCTTTCAGTGCCAAATGCTGGCGCAATCGCTAACTTAACGTCAGATCAATTAACTGCATCTGTTGCCGACTTTGACGGAAAACCCCGCACTCGCGGGGTTTCGTTCGCTTTGGTTGGTGATGAGTATCACGTGACGATTGGCGTTGATGCGCTTGAAGATGTCGCGACAAACGAAACCCCGCTGGCCTCTGTTAAGTTTGAGGAAGGTAGTGTCGCGACAAGGCATAGTTCGTCAACCGATGCAGGATTAACTGATGATCTTGTTTCTAGGGCTTCATCACTCACTGAAGAAAGAAGGATTCAGTCACCTACGGGCGTAAATGTCTTACAAGACCAGTTTTTTACAGATTCAAAAAACCCGACATTCCCTATCGACTTTTACGGTGACGGGTCATCAACCATAACATTAAGTGAGTCTGAAGCATACGCTGCGTTCGATGTTGGTGTTGATCAAGTTGCGCCTGATTTATTCAGACGAGACTATCATAAATATAAAGGTTTGTTTTTTACCGGCGGTGAGAATGCAGATTACGGAATCACACTAAGACCTTACACTGGTAGTCAGAGCTTGTTTGAGGACTTAACATTTATGGGCTTTGGCAACAAAGACTCATGGTGCTTAAATTTTCAAGCGCAAAACAGGTGGCCTATTATTGATAAATTCTCTTTGTCAGATCAAGGGGAGCATATTAATGGTATTAAGGCGATTGATGATGATACTCGTGTTATTGCTCAAGGTTCTGGTAATTCAAGGGTTATCATTGATAAGCCTCGCATCAGATACTTAAACGGTAGAGAAGCGGATACAACTGGAATTAAAATGGCTGCGACATCTGCAATTGTTCATCTTTCTGCAATTGAAAATGCTAGTAAGGGCTTGCAATTCCACTACCCGTCCAACGCAGCGAAGTTGCAAAACGGTTACTTTGAACAGGCGGGTAGTCCATCTGGAACAAAAAGCATTGTAATAGGTGATGATAATATCGTTCCTAACAATTTCTTTTTTAACTTGTACATTAAAGATGTCTATTCAAATCTCCATGCGGGCAATGGGAAATTCATTGTGATGGGTAATGCCAGTGCAAACTTTCGAGATCTTGTTTTGGACGGGCTTAATATTGCTCAAACAGCAGGTCAGCCGTTAATAGAGCCTAACGATATTCCGGCTCAATCGGCGTATGTTGGCTACGTTTCTTCTGGCGGTAAAACAGCCGTTTTACCTAAAGAGCCAAAATCTAACCCTGTTCATATTGTTGATACGTATAACCGAGAATGGAAAGTGATAAACGGTAACGGTCAAAGTTCGAAACTTAGTGGTGAATCGAAAGTGTTACCTCAAAATGCTGGCTCTATTTTAGCTGATTTTTGGTCTTATGTTGGCGATATAAGTGGTAATTACTTTAAGCGCGTTGTGACTGGTGCGGAGAGAACCTTGCTACGGGGTGCGACAACAGCGGTCCGAATCGCATCACCAGGTGCAGGAACCTATAGCACAATCACATATACCATTCCCGACATTTCAGAGCACGCCGGTATAGATAACATTATCCAGTTGTTTGCGAGGGCTGAAGGTGGTACTACAAAGACATTTAGAGTTTCAGTGAAGCTTTCAACTGGTGTTACGCATGTGTTGTCAACAACTACTGACGATGTTCCGCAGGATTGGACTGAAATAACCGTACCGTTTTTCTTTACTAATTATAACGATCTTGACGATGACGCAATTATAATCCTTGAGATATATGGTGGGTCACTGACTACTCAACTAGAGCTAACAGGTGTCAGAGCATACGAAGGGAATACAGGGCTTTGCACATCAAACGCCAAAAGTCCGACGGAGCAATCAATGTCAGCAAACCCTTGGTTCTACAAAACAAAGGTCACAATACCCTCGGGCGCGGTTAACTTTATTGTTGGATTTGACACGCCAGTACGTAATTTAGGTACAATAACAGAAACGATACTGCTAATCATTGATGGTGGCTCTACGGTTGCTGGAACTCTTGCGGCTGATGGTCTATCTGCGTCATTCAATGTAACCACGGGTAACACGGCAGTAAGAACGGCAACAGTATCTCTATATCATGGAGGATCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a3b87852cd419015c0ed59133c8d95dcb7f1c36685998e757701b0d68be6b959
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6465
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank