Protein

View in Explore
Genbank accession
QLA10724.1 [GenBank]
Protein name
hinge connector of long tail fiber, distal connector
RBP type
TSP
Evidence RBPdetect
Probability 0,85
Protein sequence
MANLSSTSTIGGMPIWHKGIFPLTPVGDSIYFKSFKIYSENDKPQAADNDFVSKQSGGTYANQVTFDKGIQLKDKNNASIALSQTVGTGPQTASLRIPGIFAIETSSGTPFVLFDPNTVSGTRLTVMGDTLAKFVYDESGRVFSPGNTPSKAHVGLDKVTNNKQVALDITALQTMVGILAAPNFITQNPASQPTHVPQFSQIVVKGSIQDFGLY
Physico‐chemical
properties
protein length:214 AA
molecular weight: 22835,53990 Da
isoelectric point:7,91274
aromaticity:0,08879
hydropathy:-0,12196

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QLA10724.1
1 214
Domain Start End Length (AA) Confidence
N-terminal 1 165 165 0,5492
Central domain 166 203 39 0,0151
C-terminal 204 214 10 0,9575
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-165
Central
166-203
C-terminal
204-214

Taxonomy

  Name Taxonomy ID Lineage
Phage Shewanella phage Thanatos-2
[NCBI] 		2734809 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QLA10724.1 [NCBI]
Genbank nucleotide accession
MT457553 [NCBI]
CDS location
range 126070 -> 126714
strand -
CDS
ATGGCAAATTTAAGCTCGACAAGTACAATTGGAGGTATGCCCATATGGCATAAAGGGATTTTCCCATTGACGCCAGTAGGCGACTCCATATATTTTAAAAGTTTTAAGATTTATTCTGAAAACGATAAACCCCAAGCAGCAGATAACGACTTCGTTTCTAAGCAATCTGGAGGCACCTACGCTAATCAAGTTACTTTTGATAAAGGTATACAGCTTAAAGATAAAAATAATGCCTCTATTGCATTATCTCAAACTGTAGGCACAGGCCCCCAAACGGCTTCATTGCGTATCCCGGGTATATTTGCTATAGAAACTAGCTCAGGTACACCTTTTGTATTATTCGACCCAAATACAGTATCAGGCACTAGATTGACAGTAATGGGTGATACACTTGCTAAATTCGTCTATGATGAATCTGGTCGAGTTTTCAGTCCCGGTAATACTCCTTCTAAAGCCCATGTTGGACTAGATAAAGTAACAAATAACAAGCAAGTTGCCCTAGATATAACAGCATTACAAACCATGGTCGGTATATTAGCTGCGCCAAATTTCATTACACAGAACCCTGCTTCCCAGCCTACTCATGTTCCTCAGTTTTCCCAAATTGTAGTGAAAGGGTCTATTCAAGATTTCGGATTATATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4117b9401900fa9642b2651e3680b6b28bb2ea01983a2340e83d851e07365b8b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5858
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of phage Thanatos infecting and lysing Shewanella oneidensis and promoting nascent biofilm formation Kreienbaum,M., Doerrich,A.K., Brandt,D., Leonhard,T., Hager,F., Brenzinger,S., Hahn,J., Ruwe,M., Briegel,A., Kalinowski,J. and Thormann,K.M. 2020-09-18 — GenBank