Protein

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Genbank accession
XUU32406.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MALYREGKAAMAADGTVTGTGTKWQSSLSLIRPGATIMFLSSPIQMAVVNKVVSDTEIKAITTKGAVVASSDYAILLSDSLTVDGLAQDVAETLRYYQSQETVIADAVDFFKTFDFESLQNLANQVKDDSQSAGTSAAAAAASETAAKTSETNAKASEVAVETARDQVQHIIDNAGDQSTLAVLAQSSGLKNIGQCANLTALRSLQFSSVGQQVFLKEHTSGQNAGGGIWYCHSLTSDTTYTDDNGCQIINDYGQVIRRKGVKELTSSYFGLRAGDTIDPVLLNMYKASRTFNIYEAKIENPGFDKGYVLQGGLRFYCGDKPFYILSYSVGTLRGPNLWHTGNNVGITFSRFKEDGTSQQAWSGGGINGFRFWGAASYLVEGNDGVDATPVRLSDMWEGDASNLWVTGYTGNSNGAVVSLYNEFAWTEGCTVENVMVRKSRRGITFLRNHNGIATDSFFRTVVDLSFNAGVPGQATQVMVVGDGTAAGECLVYGHDIKLTQWMSAGSWHDIVRLEDHSIIAETGVIKIVADGYGISKTTVPATEVVHSINVRGLNARFRSRVENWSNQAGGWGLDFLNIIFQSSMYTNAMTFYESDFDALPTINPVGMKIRFNGTFTVDERQSGKVYTLNGLIPGMTLRVKLTSRNGNDLGDAVVQEWNVFVRSTNFPCIVVPMSGGANIATTDGLAVTNTSPVQTATFLKTVTPTQARNFIGQNYGLTVKNANDDNSLSYAVNSGRKIRFILPANPGATTTTPYSVEIEVL
Physico‐chemical
properties
protein length:762 AA
molecular weight: 82210,06200 Da
isoelectric point:5,39097
aromaticity:0,09318
hydropathy:-0,13346

Domains

Domains [InterPro]
DC_0751
ATT
1–332
DC_0751
IPR059934
RBD
195–252
IPR059934 DC_0250
XUU32406.1
1 762
Architecture
ATT
STR
ATT 1-332 | STR 333-762
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XUU32406.1
1 762
Domain Start End Length (AA) Confidence
N-terminal 1 278 278 0,9951
Central domain 279 604 327 0,9889
C-terminal 605 762 157 0,9839
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-278
Central
279-604
C-terminal
605-762

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage vB_Shig_1KOFFS
[NCBI] 		3423636 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Shigella sp.
[NCBI] 		625 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XUU32406.1 [NCBI]
Genbank nucleotide accession
PV615260.1 [NCBI]
CDS location
range 37709 -> 39997
strand -
CDS
ATGGCACTATACAGAGAAGGCAAAGCGGCTATGGCCGCAGACGGAACCGTTACCGGGACTGGCACAAAATGGCAATCTTCGCTTTCGCTTATTCGCCCCGGCGCAACGATTATGTTTTTGTCGTCACCAATTCAAATGGCCGTCGTAAACAAGGTGGTTAGCGATACTGAAATTAAAGCTATCACCACAAAAGGCGCTGTCGTAGCGTCTAGCGACTACGCGATCCTTTTAAGCGACTCGCTAACCGTTGACGGCCTGGCGCAAGATGTTGCTGAAACGCTGCGCTACTACCAGTCGCAGGAAACCGTAATTGCGGATGCAGTCGATTTCTTTAAGACGTTCGATTTTGAGTCGCTGCAAAATCTTGCCAACCAGGTAAAGGATGATTCACAATCCGCAGGCACGAGCGCTGCGGCTGCTGCGGCGTCTGAAACCGCTGCAAAAACTTCAGAGACCAACGCCAAAGCGTCCGAGGTGGCAGTAGAGACTGCAAGAGACCAAGTTCAGCACATCATTGATAACGCTGGCGATCAGTCGACTCTAGCTGTTCTCGCTCAAAGTTCAGGGCTGAAAAATATCGGTCAGTGTGCTAATCTCACAGCTTTAAGGTCTTTGCAGTTTTCATCTGTTGGTCAACAAGTGTTTCTGAAAGAACATACTTCTGGACAAAATGCCGGAGGCGGTATTTGGTACTGCCATTCGCTTACATCAGACACCACTTATACTGATGATAATGGGTGCCAGATTATCAATGATTATGGACAGGTCATCCGCCGTAAAGGTGTTAAAGAGTTAACCTCAAGTTACTTCGGATTACGAGCCGGAGATACCATTGATCCTGTTCTCCTTAACATGTACAAGGCTTCGCGTACATTTAACATTTATGAGGCCAAGATTGAAAACCCCGGATTTGATAAGGGTTATGTCTTGCAGGGTGGTTTGCGGTTTTACTGTGGTGATAAGCCTTTCTACATCCTATCCTATTCGGTAGGGACTCTGCGCGGCCCAAACCTTTGGCACACCGGTAATAATGTTGGAATTACATTCTCCCGCTTCAAAGAAGATGGCACTTCGCAGCAGGCATGGTCTGGCGGCGGAATCAACGGATTCCGTTTTTGGGGTGCTGCATCTTACCTTGTCGAAGGGAATGATGGTGTAGATGCTACACCAGTTCGTCTGTCTGATATGTGGGAAGGTGATGCGTCTAACTTGTGGGTTACTGGGTATACCGGGAATTCTAATGGTGCAGTAGTGTCCCTGTATAACGAGTTTGCGTGGACGGAAGGATGTACCGTTGAAAATGTTATGGTTCGCAAATCTCGGCGAGGGATTACATTCTTGCGTAACCACAACGGCATTGCAACTGATAGCTTCTTCCGAACGGTGGTTGACCTATCATTTAATGCTGGCGTTCCTGGACAAGCAACGCAGGTAATGGTTGTCGGTGACGGGACTGCTGCTGGTGAATGTCTCGTGTACGGGCACGATATTAAGCTTACTCAGTGGATGAGCGCTGGTTCCTGGCATGACATTGTTCGTCTGGAAGACCATAGCATTATTGCTGAAACTGGTGTAATAAAAATAGTTGCGGATGGTTACGGTATATCCAAAACTACTGTACCGGCAACTGAGGTTGTTCACTCCATTAACGTGCGTGGACTCAATGCCCGGTTCCGGAGTAGAGTGGAAAACTGGTCGAATCAGGCTGGTGGTTGGGGTCTGGATTTCCTGAACATCATCTTCCAGTCCAGCATGTACACTAACGCCATGACTTTTTATGAGTCTGATTTTGACGCGCTGCCGACTATTAACCCTGTAGGGATGAAAATACGATTTAACGGTACGTTCACTGTTGATGAGCGGCAGTCTGGTAAGGTTTACACCCTTAACGGGCTAATTCCTGGAATGACGTTGAGAGTCAAGCTAACATCTCGCAACGGAAACGACCTTGGTGACGCTGTTGTTCAGGAGTGGAATGTGTTCGTTCGTAGCACTAACTTCCCATGTATAGTCGTCCCTATGTCTGGCGGTGCAAATATTGCAACTACCGATGGGTTGGCTGTTACCAACACCAGTCCAGTACAAACAGCGACGTTCCTTAAAACAGTAACACCCACTCAGGCCAGAAACTTCATCGGCCAGAACTATGGTCTTACTGTAAAAAATGCGAATGATGATAACAGCTTATCCTATGCTGTGAACTCAGGTCGCAAGATTCGTTTTATTCTTCCTGCGAACCCAGGGGCAACTACAACCACCCCTTATTCTGTTGAGATAGAGGTACTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1ce8cf486a7ffe97d54b377d7c00990b21c1e87917ffa6dce02eee1a5d70b4e7
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8730
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50