Protein

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Genbank accession
YP_007517850.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MAYIGKTPTIGNFQVCDAISVVNNQAAYTMQVGGVNVSPESANHMLVSLNGILQRSGSSFTVSGSTITFASNLVTGDVIDFIQILGNVLDLGVPSDSTVSLAKLTATGTKSSSTFLRGDNTFAAPSAGFTLSSTVATTSGTSVSFTGIPSTARLIIVNFSDYSKSGGNGTLIQLGTSSGFITSGYASNGSRFSVGDAILGRSGETAGFCLADENSDLEVAGQAIITCVDVSNNKWVFSFSGRAYATQTLLSGGFVSTGGTVTQLRVKPSGSDTFDTGEINIQYI
Physico‐chemical
properties
protein length:284 AA
molecular weight: 29102,03050 Da
isoelectric point:4,72590
aromaticity:0,08099
hydropathy:0,20739

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_007517850.1
1 284
Domain Start End Length (AA) Confidence
N-terminal 1 97 97 0,9839
Central domain 98 273 177 0,0065
C-terminal 274 284 10 0,9976
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-97
Central
98-273
C-terminal
274-284

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC019P
[NCBI] 		1283079 Uroviricota > Caudoviricetes > Autographivirales > Pelagivirus HTVC019P >
Host Candidatus Pelagibacter ubique HTCC1062
[NCBI] 		335992 Bacteria > Proteobacteria > Alphaproteobacteria > Pelagibacterales > Pelagibacteraceae > Candidatus Pelagibacter

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007517850.1 [NCBI]
Genbank nucleotide accession
NC_020483.1 [NCBI]
CDS location
range 34532 -> 35386
strand +
CDS
ATGGCATATATAGGTAAGACACCAACAATAGGAAACTTCCAAGTCTGTGATGCAATAAGTGTTGTAAATAATCAAGCAGCATACACTATGCAAGTAGGTGGAGTTAATGTATCTCCAGAAAGTGCTAACCACATGCTAGTTAGTTTGAACGGAATTTTACAGCGAAGTGGAAGTTCATTCACAGTTAGTGGCTCTACAATTACCTTTGCTTCAAATTTAGTTACTGGTGATGTAATAGATTTTATTCAGATACTAGGTAATGTTTTAGACTTAGGAGTACCAAGTGACAGTACAGTTTCACTTGCTAAACTAACTGCAACAGGAACTAAATCATCTTCTACTTTTTTAAGAGGAGATAATACTTTTGCTGCTCCATCAGCTGGATTTACTTTATCTTCAACAGTTGCCACAACATCTGGAACATCAGTTAGTTTTACAGGAATACCTTCAACAGCTAGATTAATTATAGTTAATTTTTCTGATTACAGTAAAAGTGGAGGTAACGGAACATTAATTCAATTAGGCACATCTAGTGGTTTTATTACATCTGGTTATGCATCAAATGGTTCAAGATTTTCTGTTGGAGATGCAATTCTGGGAAGAAGTGGTGAAACTGCTGGTTTTTGTTTAGCTGATGAAAATTCAGACCTTGAAGTTGCTGGTCAAGCAATAATAACTTGTGTTGATGTTTCTAACAATAAGTGGGTTTTTTCATTTTCTGGTAGAGCATATGCTACACAAACTTTACTTTCAGGTGGTTTTGTATCTACAGGAGGAACAGTAACACAATTAAGAGTAAAACCATCTGGTTCAGACACTTTTGATACAGGAGAAATAAATATTCAATATATATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4ce64eb6e7a18d4b9fd5a8669b86dce5c1844daccd68ce444a5079c7ff3ade40
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8746
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50