Protein

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UniProt accession
D0Q1C4 [UniProt]
Protein name
Tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence RBPdetect
Probability 0,81
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MSGTRAPKTIVVYDITGQTDYTIPFEYLARKFVVVTLIGQDRKVLTLNTDYRFTTKTTIGLSDPSPVGYNKIEIRRFTSATDRLVDFHDGSILRAYDLNLSQIQTLHVAEEARDIAGDSIDVDDNGDLDARGRKIVNLADAEDDTDAVNYGMLKKFDNSTFNNAQKAEASANAAKSSENKAKNSELRSIEAEAKCLSSAGTAMTAAADANRSKVAAEDAEQVVVPLVPIVEKASQDAAKAAADAAQAVQDVKDLGAVPIGTIVTFIKTPPAGYLKCDGSTFSQTEYPELYAYLGTNVLPNLNDRYLKQPSDEVNINQGFNAQMPDHWHDVTEHTHTRGNMEITGEFRNVNNSGTWREMTYTGGAFHAGKPEPNCAFVQSLTPTYTGLTMAYFNASRTWTGNTSASLIKTEGINQSSLSIAIGQALEVKHHTVIFAIKAAGKVSDEGLMEVTQIKADVEKLRNSVRIWFTLGDENPADFFGGQWELINADATIAFGDGSVQTGAAEGNNNPTVPLPAHSHTFTGNALPAHKHQSMFPDKAGNIPYLGGVGDWSWRDTTAVSAGTPSGTISTSGTANATIDVRGARIKINVWKRID
Physico‐chemical
properties
protein length:594 AA
molecular weight: 64140,60290 Da
isoelectric point:5,28599
aromaticity:0,07576
hydropathy:-0,35926

Domains

Domains [InterPro]
DC_1510
STR
1–467
DC_1510
IPR005604
ATT
7–130
IPR005604 SSF88874
IPR037053
ATT
255–307
IPR037053
IPR011083
ATT
260–303
IPR011083
D0Q1C4
1 594
Architecture
ATT
STR
ATT
STR
ATT 1-130 | STR 131-254 | ATT 255-307 | STR 308-467 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage N4
[NCBI] 		644563 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Chatterjeevirus
Host Vibrio cholerae O1
[NCBI] 		127906 Bacteria > Proteobacteria > Gammaproteobacteria > Vibrionales > Vibrionaceae > Vibrio

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ACR16505.1 [NCBI]
Genbank nucleotide accession
FJ409640 [NCBI]
CDS location
range 32890 -> 34674
strand +
CDS
ATGTCAGGCACTCGTGCTCCTAAGACTATTGTGGTTTATGATATCACAGGTCAAACAGACTATACGATTCCCTTCGAGTACCTTGCTCGTAAGTTCGTAGTGGTCACTCTTATTGGTCAAGACCGTAAGGTTCTGACTTTAAATACCGACTATCGGTTTACCACAAAGACAACTATCGGTTTGTCAGACCCAAGTCCTGTAGGTTATAATAAAATTGAGATTCGTCGATTCACTTCAGCTACTGACCGTCTGGTAGATTTTCATGATGGTTCTATCCTTCGTGCTTACGATTTGAACCTCTCACAGATTCAAACTCTCCACGTTGCTGAAGAAGCTCGTGACATTGCAGGAGACTCTATTGATGTTGATGATAACGGAGACTTAGATGCTCGTGGTCGTAAGATTGTTAACCTTGCAGATGCAGAGGATGATACCGATGCAGTGAACTATGGGATGTTGAAGAAGTTCGATAATTCTACTTTCAACAATGCTCAAAAAGCTGAAGCTTCTGCTAATGCTGCTAAATCTTCTGAGAACAAAGCTAAGAACTCAGAGTTACGTTCTATTGAAGCTGAGGCAAAGTGTCTTTCGTCTGCTGGTACAGCTATGACTGCTGCTGCGGACGCTAATCGTTCTAAAGTAGCCGCTGAAGATGCTGAACAAGTAGTCGTACCATTAGTCCCAATCGTAGAGAAAGCCTCTCAGGATGCTGCTAAAGCTGCTGCTGATGCTGCTCAAGCGGTACAGGATGTTAAAGACCTTGGTGCTGTTCCTATTGGTACAATCGTTACGTTCATTAAAACGCCTCCTGCTGGTTACTTGAAGTGTGATGGTTCTACCTTCTCACAAACTGAATACCCTGAACTTTATGCTTACTTAGGGACTAACGTTCTACCTAACCTTAATGACCGCTATTTGAAACAGCCTTCTGATGAAGTAAACATTAACCAAGGGTTTAACGCTCAGATGCCAGACCACTGGCATGATGTCACAGAGCATACCCATACTCGTGGTAACATGGAGATTACTGGTGAATTTCGTAATGTGAATAACTCAGGTACTTGGCGTGAAATGACATATACCGGTGGTGCTTTCCATGCTGGTAAGCCTGAGCCTAACTGTGCTTTCGTACAAAGTCTCACACCTACATATACAGGTTTAACAATGGCTTACTTCAATGCTTCTCGTACTTGGACAGGTAATACCTCTGCTTCTTTGATTAAGACAGAAGGAATCAATCAGTCTTCCCTAAGTATCGCTATTGGACAGGCTCTGGAAGTTAAACATCATACGGTTATCTTTGCGATTAAAGCTGCTGGTAAGGTTTCTGATGAAGGTCTAATGGAAGTCACTCAGATTAAAGCTGATGTGGAGAAGTTAAGAAACTCTGTGCGTATCTGGTTTACCCTTGGTGATGAGAACCCTGCGGATTTCTTTGGTGGACAGTGGGAGTTGATTAATGCGGATGCAACGATTGCTTTCGGTGATGGTAGTGTTCAAACAGGAGCTGCTGAAGGTAACAACAACCCTACAGTACCTCTTCCAGCTCACAGCCACACGTTCACAGGTAATGCTTTACCCGCACATAAACACCAATCAATGTTTCCTGATAAAGCTGGTAACATTCCGTACCTTGGAGGTGTAGGGGATTGGTCTTGGAGAGATACTACAGCGGTCTCTGCTGGTACACCTTCAGGTACAATCTCAACGTCTGGTACTGCTAATGCAACTATTGATGTTCGTGGTGCTCGTATTAAAATCAACGTCTGGAAACGTATAGACTAA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0098015 virus tail Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0098671 adhesion receptor-mediated virion attachment to host cell Biological Process IEA:UniProtKB-KW (UniProt)
GO:0046718 symbiont entry into host cell Biological Process IEA:UniProtKB-KW (UniProt)

Tertiary structure

PDB ID
660037766c630300b05b078c1ec78e8afbc143de60791daa047bf00f24879aa5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6666
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
— — 21430354 PubMed