Protein

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Genbank accession
XYR96006.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,68
TF
Evidence RBPdetect2
Probability 0,64
Protein sequence
MSRIRANNIVNGAGTGAPTFPNGAVISGIATINADIDSNSNITVNQITSLQSLGVGTGATVTNPADNELAFNTNGTERVRVDSSGNVGIGTEEPTKALHISQNSDVAIRLQARNANVDNTSWEIVVGGNPSNDAEMVFRTRNDAGTGGSEIARFTTGGDLKFPSGGGIDFSATADGSGTTTSEVLDDYEEGTWTPTVTQGTLNTNNAQCRYIKIGNKVSISGIFYQFSNITSTDGVTIGGLPFARASYSQQNVGPVFLRFVSMTRDFLISYIDSNTTIAFFGCDLNDTGYDQLDYQHLTSSTNTQLRTQIEYYTE
Physico‐chemical
properties
protein length:315 AA
molecular weight: 33473,11720 Da
isoelectric point:4,46785
aromaticity:0,07937
hydropathy:-0,30698

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYR96006.1
1 315
Domain Start End Length (AA) Confidence
N-terminal 1 21 21 0,9481
Central domain 22 220 200 0,0814
C-terminal 221 315 94 0,9991
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-21
Central
22-220
C-terminal
221-315

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage RB11-B
[NCBI] 		3412546 Viruses >
Host Synechococcus sp. MW02
[NCBI] 		1620844 Cyanobacteriota > Cyanophyceae > Synechococcales > Synechococcaceae > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYR96006.1 [NCBI]
Genbank nucleotide accession
PV261925.1 [NCBI]
CDS location
range 176934 -> 177881
strand -
CDS
ATGTCTAGAATAAGAGCCAATAACATTGTCAATGGTGCTGGTACTGGAGCTCCTACATTTCCTAATGGTGCAGTCATCAGTGGAATTGCAACAATAAATGCTGATATTGATTCGAATAGTAATATTACTGTGAATCAGATTACATCATTACAATCACTTGGAGTCGGTACTGGAGCAACTGTTACTAACCCTGCTGATAATGAACTCGCATTTAATACTAATGGAACTGAGAGAGTTCGTGTAGATTCAAGTGGCAACGTAGGTATTGGTACTGAAGAACCAACAAAAGCTTTACATATATCACAAAATTCTGACGTTGCAATCAGACTTCAGGCTAGAAATGCAAATGTAGATAATACATCATGGGAAATTGTAGTAGGTGGAAACCCTTCAAATGATGCAGAAATGGTCTTCAGAACCAGAAATGATGCTGGTACTGGTGGTTCTGAAATAGCCAGATTTACAACTGGTGGAGACTTAAAATTCCCTAGTGGTGGTGGTATTGACTTCTCTGCGACTGCTGATGGCAGTGGAACTACGACCAGTGAAGTACTCGATGACTATGAGGAAGGCACTTGGACGCCAACGGTAACACAAGGAACTTTAAACACAAACAACGCTCAATGTCGTTACATAAAAATTGGAAATAAAGTAAGTATTAGCGGTATTTTTTATCAATTCAGCAACATTACCAGTACTGATGGTGTCACAATTGGCGGGCTACCGTTTGCTAGGGCAAGCTATTCACAGCAAAATGTTGGTCCTGTGTTTTTGCGTTTTGTTAGCATGACAAGAGATTTTCTTATTTCTTACATAGATAGCAATACTACTATTGCTTTTTTTGGTTGTGACCTTAACGATACAGGCTACGACCAACTAGATTACCAGCATTTAACTAGCTCAACTAATACTCAATTACGCACGCAGATCGAGTATTATACCGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a0708f013e126b32cef23648f8b4f8d2dee090aa806e48dcc760c99b7819f5f0
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7588
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50