Protein

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Genbank accession
UPI11789.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSNSNYMYFVDFEKFGIRSDGTEARSTTDGWIAALKEAVELGYHTVYVPEGLYLIDAVSTVGSLPEYGGGLMFPSNIEVIFHERALFQVAPNSSTGYACFNLENVENVTLRGGTIIGDRYEHDYVTDGVPDNRKTHEWGHGIHIRGCRNITVENATVMNCTGDNIWVPAKGMMNWEGSTYIPSEGITIRKCILIRGRRNNLATNGCLGMNVDDCDFIEAGGDTIGPAFGIDLEGFAENSIKYDHPYEINITNCRFKRNGKGALNINVTGKVHATNNFSDDVFSYGFSTDSTISNNTITNEAGVYKPYGIDSIRKSSSETGNRTIITGNQIRGFATGICARGAGVIVSQNYLEGISSVGINPYLSEDVMVANNTINSDCLHVWVRNSVDVQVGNNKGKGAENYYGIKVEESSDVVVNDNKHVAKGGIQVARSTNVRIKDNDLTLIGNGNGISWDKTSQVKLVKSNWISGAVAAAISGYADTYSTIISYNILEDCKYLIAIYLNGGTQHMLKGNDIMFRRGANGGYGVQLVNTTQARLISNDVRTMDGCTLHASYDSTGSTYTKYAYNTYIGKINLGQADTENYNTKLD
Physico‐chemical
properties
protein length:587 AA
molecular weight: 64080,68670 Da
isoelectric point:5,46725
aromaticity:0,09199
hydropathy:-0,30307

Domains

Domains [InterPro]
IPR012334
STR
11–337
IPR012334 IPR007742
IPR011050
STR
33–394
IPR011050 IPR012334
IPR006626
Unmapped
105–146
IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 DC_0453
IPR039448
ENZ
135–298
IPR039448 IPR006626 IPR006626 IPR006626 IPR006626
IPR011050
STR
382–539
IPR011050
UPI11789.1
1 587
Architecture
STR
STR 11-585 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UPI11789.1
1 587
Domain Start End Length (AA) Confidence
N-terminal 1 23 23 0,9325
Central domain 24 576 554 0,9976
C-terminal 577 587 10 0,2370
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-23
Central
24-576
C-terminal
577-587

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage SBSphiJ1
[NCBI] 		2930338 No lineage information
Host Bacillus subtilis BEST7003
[NCBI] 		1204342 Bacillota > Bacilli > Bacillales > Bacillaceae > Bacillus > Bacillus subtilis BEST7003

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UPI11789.1 [NCBI]
Genbank nucleotide accession
OM982668.1 [NCBI]
CDS location
range 21399 -> 23162
strand -
CDS
TTGTCGAACTCGAACTATATGTACTTTGTTGACTTTGAGAAATTCGGAATCAGGTCTGATGGGACAGAGGCTAGATCAACCACTGACGGGTGGATTGCTGCGCTTAAAGAGGCTGTAGAGCTAGGGTATCACACGGTATATGTTCCAGAGGGTCTTTACCTTATTGACGCTGTAAGCACTGTAGGCAGCCTTCCAGAGTACGGTGGTGGCTTAATGTTCCCATCAAACATCGAGGTCATCTTCCATGAGAGAGCGCTATTTCAGGTAGCGCCAAATAGTTCAACAGGGTACGCCTGCTTCAACCTCGAAAATGTGGAAAATGTGACTCTTCGAGGAGGAACGATCATCGGGGACCGCTACGAGCATGACTACGTTACAGATGGAGTACCAGATAACCGTAAAACTCATGAGTGGGGTCACGGAATCCATATCAGAGGCTGCCGTAACATCACAGTAGAGAACGCAACTGTCATGAACTGCACAGGTGACAACATCTGGGTACCTGCTAAGGGTATGATGAACTGGGAGGGCAGCACCTACATACCATCTGAGGGGATCACTATACGTAAATGTATTCTGATTCGAGGAAGACGTAATAACCTAGCCACGAACGGCTGCCTTGGAATGAATGTTGACGACTGTGATTTTATCGAAGCTGGTGGAGACACTATCGGACCCGCATTCGGTATTGACTTAGAGGGATTCGCTGAAAACAGCATTAAGTACGACCATCCTTATGAAATCAACATCACGAACTGCCGCTTCAAAAGAAATGGTAAAGGTGCCTTAAACATCAACGTTACAGGGAAAGTTCATGCCACTAATAACTTCTCCGATGACGTGTTCAGCTACGGGTTCTCAACAGATAGTACGATCAGCAATAACACGATAACTAATGAGGCAGGGGTATACAAACCATACGGTATAGACTCCATCCGTAAGTCCTCCTCTGAAACTGGTAACCGTACAATCATCACAGGTAACCAGATTAGAGGATTTGCTACAGGTATTTGTGCCCGAGGTGCAGGTGTTATTGTCAGTCAGAACTATCTTGAAGGTATAAGCTCCGTGGGGATCAATCCTTACCTTTCCGAAGATGTTATGGTAGCTAACAACACGATTAACAGTGACTGCCTACATGTATGGGTCCGTAACTCTGTGGATGTTCAGGTAGGCAACAATAAAGGTAAAGGCGCTGAGAATTACTACGGAATCAAAGTAGAGGAATCCAGTGATGTAGTTGTCAACGATAACAAACATGTAGCCAAAGGTGGTATTCAGGTTGCCCGGTCAACAAATGTACGTATCAAAGACAATGATTTAACTCTTATCGGTAATGGTAATGGTATTAGCTGGGACAAGACTTCACAAGTTAAGTTGGTTAAATCCAACTGGATAAGTGGTGCTGTAGCAGCTGCTATTTCCGGCTATGCAGATACTTACTCCACTATTATCTCCTACAACATCTTAGAAGACTGTAAGTATCTAATCGCTATCTACTTGAATGGCGGGACACAGCACATGCTTAAAGGTAATGACATCATGTTCAGAAGAGGAGCTAACGGAGGATACGGAGTCCAGTTAGTAAATACCACACAAGCTAGATTAATCAGCAATGATGTTCGTACAATGGACGGCTGCACTCTGCATGCTTCTTACGACTCCACAGGATCAACATACACAAAGTATGCGTATAACACTTACATCGGAAAGATCAACCTTGGTCAAGCAGACACTGAAAACTACAACACAAAATTAGACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e46b7bfd476e59189375d23a3a5e53588387af0ce1354790a28631a793214a11
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8814
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Viruses inhibit TIR gcADPR signalling to overcome bacterial defence Leavitt,A., Yirmiya,E., Amitai,G., Lu,A., Garb,J., Herbst,E., Morehouse,B.R., Hobbs,S.J., Antine,S.P., Sun,Z.J., Kranzusch,P.J. and Sorek,R. 7935 36174646 GenBank