Protein

View in Explore
Genbank accession
QBX30096.1 [GenBank]
Protein name
endopeptidase
RBP type
TF
Evidence RBPdetect2
Probability 0,83
Protein sequence
MRTQDIALKPFVNGASVGAESALEIWKENLVGDDTFDVKSDILTLGSFNWEIDKIGNARGALGGVAGSILDVYGGEYEFDNRTIILRKQMGRKAPTVLEYGRNIVSVEEERLLDGNYTSIYPYVRYTPQPKPQEEAPGKPHVGEHKQPEEQLVTLPEFILDGQYLSLYAQRRIQMVDLSSHFNDDKNKKEPTIEEIRKLAQKYLKDNNVGAPKVSIEVDYIDLSQTLDYQDFRVMEEVELCDIVPLYYPKFGITTESEKVVEIVYDVYTDSNHTIKLGTIGQSISKSLTGGVSERINALENNQKVITNNQKQFELNLPKYLNDINGKRVWYEKPDDNIEHKIGDYWFEKNGKYQRTWIWDGHQWVKVLDTEDLNPNQRAFDEAMAEIEKAKKAQEEINQRTDKELEEFRATLKNLALPEEAIKKITEAIKVDDIPSIKQSFDDLKNKVSETSETSRLNAEILGNNGKTRYNKNLLVGDPNRTKTYDEDYIEVEANDGGFKRGETYTISFSQTCELLQKVAITLTQANNKGVKLVLTPTKAKTDAQTFEVTKDKQSIEVYPLSYTGVLTGDWYKPKQIDLNASDTQELALEMAYKEVVDGKDAAITGIWSDSPQIILDGGKK
Physico‐chemical
properties
protein length:621 AA
molecular weight: 70554,35290 Da
isoelectric point:4,93524
aromaticity:0,08535
hydropathy:-0,65330

Domains

Domains [InterPro]
DC_1571
ATT
10–280
DC_1571 Coil
IPR007119
Unmapped
34–278
IPR007119
IPR010572
ENZ
68–289
IPR010572
DC_1613
STR
219–586
DC_1613
QBX30096.1
1 621
Architecture
ATT
STR
ATT 10-280 | STR 281-586 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan522
[NCBI] 		2548235 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus pyogenes MGAS8232
[NCBI] 		186103 Bacillota > Bacilli > Lactobacillales > Streptococcaceae > Streptococcus > Streptococcus pyogenes

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX30096.1 [NCBI]
Genbank nucleotide accession
MK448973 [NCBI]
CDS location
range 31368 -> 33233
strand +
CDS
ATGCGCACACAGGATATTGCTTTAAAACCGTTTGTAAACGGTGCGAGCGTAGGAGCCGAATCAGCTTTAGAAATCTGGAAAGAAAACCTTGTTGGTGATGATACTTTTGACGTTAAAAGCGACATCTTAACGCTTGGTAGCTTTAACTGGGAAATTGATAAAATCGGCAATGCCCGTGGTGCTCTAGGAGGTGTCGCTGGCTCTATCCTAGATGTTTACGGTGGTGAGTACGAGTTTGACAACCGTACAATCATCTTACGCAAGCAAATGGGGCGTAAAGCTCCCACGGTATTGGAGTATGGCCGTAATATCGTCAGCGTAGAGGAGGAGCGATTGCTAGATGGCAATTACACCTCTATCTATCCTTACGTAAGATATACGCCACAACCAAAACCGCAAGAGGAAGCCCCTGGTAAGCCGCATGTAGGCGAGCATAAACAACCCGAAGAACAGCTAGTGACATTGCCTGAATTTATCCTAGATGGTCAGTATCTCAGCTTATATGCTCAGCGCAGAATCCAAATGGTTGATTTATCAAGTCATTTTAACGATGACAAAAATAAAAAAGAGCCAACGATCGAAGAAATCCGAAAGCTGGCTCAGAAATACCTTAAGGATAATAACGTTGGTGCACCAAAAGTCAGCATTGAGGTTGATTATATTGACTTGTCACAAACGCTTGACTATCAAGATTTTAGAGTCATGGAAGAGGTTGAGCTTTGCGACATTGTACCACTTTATTATCCAAAGTTTGGCATCACAACTGAGTCTGAAAAAGTCGTTGAGATTGTCTATGACGTCTATACAGATAGCAATCACACAATCAAATTAGGTACGATTGGTCAATCAATCTCTAAAAGTTTGACTGGTGGTGTTTCTGAACGTATTAATGCGTTGGAAAATAATCAAAAGGTAATTACTAACAACCAAAAACAATTTGAACTCAATCTGCCTAAATACCTCAATGACATCAATGGTAAACGCGTTTGGTACGAAAAACCAGATGACAATATTGAGCACAAGATAGGTGATTACTGGTTTGAAAAAAATGGTAAGTATCAGCGCACTTGGATTTGGGATGGCCATCAATGGGTCAAGGTACTAGATACAGAGGATTTAAACCCTAACCAACGGGCCTTTGACGAGGCAATGGCTGAAATCGAAAAAGCCAAAAAAGCGCAAGAAGAAATCAACCAGCGCACCGATAAAGAGCTTGAAGAATTTAGAGCTACCCTCAAAAACCTAGCGTTACCAGAGGAAGCGATTAAAAAAATCACAGAGGCTATCAAAGTTGATGACATCCCGTCTATTAAACAAAGCTTTGATGACCTCAAAAACAAAGTCAGTGAAACGAGCGAGACGTCCCGTCTAAACGCCGAAATTTTAGGTAACAACGGTAAGACCCGCTATAACAAAAATTTATTGGTTGGCGACCCTAACCGCACCAAAACCTATGATGAGGATTACATCGAGGTAGAAGCCAACGATGGTGGTTTTAAACGTGGCGAGACGTACACGATTAGCTTTAGCCAGACTTGTGAGCTACTCCAAAAAGTGGCTATCACGCTGACACAGGCTAACAACAAGGGAGTTAAGTTAGTGCTGACACCAACTAAAGCAAAAACGGATGCACAGACGTTTGAGGTCACTAAGGATAAACAGTCTATAGAGGTATATCCTTTAAGTTATACAGGCGTTTTAACTGGTGACTGGTATAAACCTAAGCAAATAGATTTAAACGCCTCAGACACGCAGGAATTGGCTCTAGAGATGGCTTATAAAGAGGTTGTGGATGGTAAGGATGCCGCAATCACAGGGATATGGTCAGACAGCCCACAAATTATATTAGACGGAGGTAAAAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
41e729608e7c48d6f32acd2d785dfb51c7ff97d0fbc7f3954c958a1611f317db
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6366
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank