Protein
View in Explore- UniProt accession
- M4PQN3 [UniProt]
- Protein name
- F5/8 type C domain-containing protein
- RBP type
-
TSP
- Protein sequence
-
MADRNALVIIDGQVQELPAGDSLVGGGSGGGAGTVVYKAMLSTYINNDFVTYSASEFATKGNIYKMLSERVLTSITVMLDLGQSVKLVIAKVGDVSPYTIEEIVYESPVKVITENNSNRFELTNGLNLNINTNYAFMFVRVDGTSVTTLGIPFEGVAPWNDRDGHFVFEAASRYATTQPQVGDDTFYNTTTNVTMVFATVDPDLHDLLNTGESINFISNVGGTYTVGPDITLSDPDTTQVTESPFVNSPLINTGQFDTVTNKPIWRFATISDNQSNGIDWAVSFEVATSVSFRYMNSNEVGFDYLHVYVDGVEVFNSKNKTVGTWFSHQFVIDAGSHVIRISYQKDNSNSSNDDTVYVSGFGYQEAVGGPFKKNDFIEFENSIYFALNDTTATPDTEPQSWVLFEKGSQPFGAKFWRWTFTSNRLTTIGYISPDVGTNGTYTQADVTYGPAANAFDGSSANFWGYASGDVATGDTWVQIEYSEEKWIQNYSITSRSGSGSQGPDGWILSYSEDGVTWVDVSTETGVPSWGNSETRDFVNQEGLPSVLELPNYTSNHKNKVLKAVDGELIWASENEQINVTASETLTDSDFIGGILKKVESGTEVAITVPAGLTNKELCTFIQTNLGKISFVADTGVTILSADNAKKTRTRYSSATLIPVKDTVNVYYLVGDLEV
- Physico‐chemical
properties -
protein length: 674 AA molecular weight: 73575,26430 Da isoelectric point: 4,35190 aromaticity: 0,11424 hydropathy: -0,21128
Domains
Domains [InterPro]
IPR000421
RBD
420–533
RBD
420–533
DC_1166
STR
421–674
STR
421–674
G3DSA:2.60.120.260
STR
432–543
STR
432–543
IPR000421
RBD
446–524
RBD
446–524
IPR008979
STR
449–532
STR
449–532
1
674
Architecture
STR 421-674
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
674
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 228 | 228 | 0,3479 |
| Central domain | 229 | 432 | 205 | 0,2721 |
| C-terminal | 433 | 674 | 241 | 0,6143 |
Note: Constraints were applied during segmentation.
Fixed 117 C-terminal predictions appearing before Central domain
Fixed 117 C-terminal predictions appearing before Central domain
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-228
1-228
Central
229-432
229-432
C-terminal
433-674
433-674
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Sulfitobacter phage phiCB2047-B [NCBI] |
754046 | Uroviricota > Caudoviricetes > Schitoviridae > Raunefjordenvirus > Raunefjordenvirus CB2047B |
| Host |
Sulfitobacter sp. CB2047 [NCBI] |
1525218 | Bacteria > Proteobacteria > Alphaproteobacteria > Rhodobacterales > Rhodobacteraceae > Sulfitobacter |
Coding sequence (CDS)
Coding sequence (CDS)
No CDS data available.
Genome Context
Genome Context
Tertiary structure
PDB ID
aa91b09afcdc42d6fed1ebcda63b9cafb4c859fa5df986b1326ff0496ce086c7
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50