Protein

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Genbank accession
WZB35770.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 0,93
Protein sequence
MTKVTGSYESIIRGVSEQVPQDRFVGQHWAQDNMVSDPVRGLSRRHGSLMLREKKMTGVNITPATISDAANYKEFSFTINSVEYSLMYRPGPKPTGSTMSPLVCIRKSDGFILDVVAPAGEASLVTSLLDGGLSAVGNIAKYLLLAPQNTPAQVTVLDQVKDGLLSKWAACWVRQGAYSRTYRIKVTTQTGAVYTGSYTTPSSYYQGVLNTSDIPSTATDYQKQVNDRVYAYQTAVNQWIGTAAAAIQPQNIIQQLANSVGGTGYPGGIGVNGSHAVFTDAIAVEVDDGGDGSFMKGIAQEVQSAADLSPIHATQKYVRVRPRGDSGSGTYYVKAVAKDGVDGTPGTWKEVIWVEAEGVRRTPGFVVMLSQIIGNTLYVATTQAQLASVTGDTNQIPWAFSEAGDLDSQPTPAFFGKTISYIGNFQDRLMLVSGSTVNLSKSGDYFNFFRKSALTIADDDPVEMFALGSEGDTITDATMIDRSLILFGRQYQYAMDGRNAMSPKTAFIAIQSAHEDANGCPPVAGGNYIFFSQLRSRRLTIQQMQTGDYADSFRAFDISTQLDGYLNGTPRQILAMTSPSWLAVRTRELTNGFYVFSYLDSADQSQRLLDSWSKWTFNSALGQLVGITTNDGDIYSVTLRQGIDGAYLVLDRFIRDAGKSDYPHLDSMRPWNDGGNTGTIRPGWANAAQASIAYSRLSGDKFLLGQPLADYQKLFDASVGTSHAYAMMGTNYESSMEPTAPYIRDQKDKAILDGRLTLTALQVTLAESAAMRAYLRGYSAPLSEEQRILDWIYRPAGEWVLNTQQVAPVISVPVHVLKEIREFRLRLASRNWLPLTLTSFEWSGQFFTQRRS
Physico‐chemical
properties
protein length:852 AA
molecular weight: 93294,81690 Da
isoelectric point:6,01382
aromaticity:0,10094
hydropathy:-0,22735

Domains

Domains [InterPro]
IPR058003
TTP
1–51
IPR058003 IPR058003
DC_0058
STR
1–852
DC_0058
WZB35770.1
1 852
Architecture
STR
STR 1-852
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WZB35770.1
1 852
Domain Start End Length (AA) Confidence
N-terminal 1 202 202 0,8760
Central domain 203 401 200 0,1755
C-terminal 402 852 450 0,2354
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-202
Central
203-401
C-terminal
402-852

Taxonomy

  Name Taxonomy ID Lineage
Phage Psuedomonas phage SVOphi44
[NCBI] 		3137921 Viruses >
Host Pseudomonas putida KT2440
[NCBI] 		160488 Pseudomonadota > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas > Pseudomonas putida

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WZB35770.1 [NCBI]
Genbank nucleotide accession
PP430153 [NCBI]
CDS location
range 28465 -> 31023
strand +
CDS
ATGACTAAAGTGACTGGCTCGTATGAGTCCATCATTCGGGGCGTGTCCGAGCAGGTTCCGCAAGACCGTTTCGTCGGCCAGCACTGGGCTCAAGACAACATGGTCAGCGACCCTGTGCGCGGACTGTCCCGACGCCACGGCTCCCTGATGCTCCGTGAGAAGAAGATGACCGGCGTAAACATCACCCCGGCCACCATCTCCGACGCGGCCAACTACAAGGAGTTCAGCTTCACAATCAACTCGGTCGAGTACAGCCTTATGTACCGGCCCGGCCCGAAGCCCACGGGCAGTACCATGTCCCCGCTGGTGTGTATCCGCAAGTCGGACGGCTTCATCCTCGACGTGGTAGCCCCAGCCGGGGAAGCTAGCCTCGTTACGTCCTTGCTGGACGGCGGGCTGAGCGCCGTGGGCAACATCGCCAAGTACCTGCTGCTGGCCCCGCAGAATACCCCGGCGCAAGTCACCGTACTGGATCAGGTGAAGGACGGCCTGCTGTCCAAGTGGGCTGCCTGCTGGGTGCGCCAAGGCGCGTACTCCCGCACTTACCGCATCAAGGTGACGACCCAGACCGGGGCTGTGTACACTGGCTCGTACACCACACCATCCAGCTACTACCAAGGCGTGCTGAATACCAGCGACATCCCGTCCACCGCGACTGACTACCAGAAGCAGGTCAACGACCGCGTGTACGCCTACCAGACCGCTGTGAACCAGTGGATCGGTACGGCTGCCGCAGCTATCCAGCCGCAGAACATCATCCAGCAGCTGGCCAACAGCGTGGGCGGCACCGGGTATCCGGGTGGCATCGGCGTCAACGGCTCCCATGCTGTGTTCACCGACGCCATTGCGGTCGAGGTTGATGACGGCGGCGACGGTAGCTTCATGAAGGGCATCGCGCAGGAGGTGCAGAGCGCCGCTGACCTCAGCCCTATCCATGCCACCCAGAAGTACGTGCGAGTCCGCCCCCGTGGGGACAGCGGCTCGGGCACCTACTACGTCAAGGCCGTGGCCAAGGATGGGGTGGACGGGACTCCCGGCACATGGAAGGAAGTGATCTGGGTGGAGGCCGAGGGCGTGCGCCGCACTCCCGGCTTCGTGGTCATGCTGTCCCAGATCATCGGCAACACGCTGTACGTGGCCACCACGCAAGCGCAACTGGCCTCTGTGACCGGGGATACCAACCAGATCCCTTGGGCGTTCAGCGAGGCAGGGGACTTGGATAGCCAGCCGACGCCAGCCTTCTTCGGCAAGACGATCAGCTACATCGGCAACTTCCAAGACCGGTTAATGCTGGTCAGCGGCTCCACGGTGAACCTGTCCAAGTCGGGTGACTACTTCAACTTCTTCCGCAAGTCCGCCCTGACAATTGCGGACGACGACCCGGTGGAGATGTTCGCCCTCGGCTCCGAAGGCGATACCATCACCGACGCCACCATGATCGACCGCTCGCTGATCCTGTTCGGCAGGCAGTACCAGTACGCAATGGACGGGCGCAACGCCATGTCCCCGAAGACGGCCTTCATCGCTATCCAGTCCGCACACGAGGACGCCAACGGATGCCCACCGGTAGCTGGCGGTAACTACATCTTCTTCTCGCAGCTGCGCTCCCGGCGCCTGACGATCCAGCAGATGCAGACCGGCGACTACGCGGACAGCTTCCGTGCGTTCGACATCAGCACCCAGCTGGACGGCTACCTCAACGGCACGCCTCGCCAGATTCTGGCTATGACCTCGCCCTCGTGGCTGGCCGTGCGGACTCGGGAGCTTACCAACGGGTTCTATGTGTTCAGCTATCTGGACTCGGCGGACCAATCGCAACGCCTGCTGGACTCGTGGAGCAAGTGGACGTTCAACAGCGCCCTCGGGCAGCTGGTAGGGATCACCACCAACGATGGCGACATCTACTCGGTGACGCTGCGGCAGGGTATCGACGGGGCGTACCTCGTCCTCGACCGGTTCATCCGAGATGCCGGTAAGTCGGACTACCCACACCTCGACTCGATGCGCCCGTGGAATGACGGAGGCAACACCGGAACCATCCGGCCCGGCTGGGCAAACGCGGCGCAGGCGTCCATTGCGTACAGCCGGCTCTCTGGGGACAAGTTCCTGCTGGGGCAGCCGCTGGCCGACTACCAGAAGCTGTTCGATGCCTCGGTAGGGACCAGTCATGCTTACGCGATGATGGGCACCAACTACGAGAGCAGCATGGAGCCAACGGCACCGTACATACGGGACCAGAAGGACAAGGCGATCCTCGACGGGCGCCTCACCCTGACTGCCCTGCAAGTCACGCTGGCCGAGTCGGCAGCAATGCGGGCCTACCTTCGCGGGTACTCCGCACCGCTGTCAGAGGAGCAGCGCATTCTCGACTGGATTTACCGTCCGGCAGGGGAATGGGTGCTCAACACCCAGCAGGTAGCGCCTGTGATCTCGGTGCCTGTGCACGTCCTCAAGGAGATCAGGGAGTTCCGTCTCCGTCTGGCTTCTCGTAACTGGCTCCCGCTCACGCTGACCAGCTTCGAGTGGTCGGGCCAGTTCTTCACCCAACGTAGGAGTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
0784f16aa99ad6732e156aa6beb3d1b79535bd880126f7b85331d58289ec3733
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2832
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Diverse and abundant phages exploit conjugative plasmids Quinones-Olvera,N., Owen,S.V., McCully,L.M., Marin,M.G., Rand,E.A., Fan,A.C., Martins Dosumu,O.J., Paul,K., Sanchez Castano,C.E., Petherbridge,R., Paull,J.S. and Baym,M. — — GenBank