Protein

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Genbank accession
XLV07927.1 [GenBank]
Protein name
regulator of chromosome condensation
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MGHYICVDGNQLSKMGVTGSSFLDRWVLCPYSVDDFWSSLYCTIIRTKQGELYYSGTNSVFGISSSVSTWTRCESYFGSISPSSIKDIKITSSTSTNNSMLILTSDGQLYGIGMNGASELGTATTPITSPLLIDTSVSAIASSEMSRNFHYIKDGIYYRCGENTFYQLGTGDNNPITTFTALNLGSSHVIAVQATRWVTRLIVQSSTSALSLMAAGWNTQLTIGGSENTAIIRSSFTTNPYTDITANSFDKLSPVSYVNAIKSSTNIINTNGKGYNSNGAGLGRNAFSGNYGSILPIEFFDDSVDLSHVEWFGTIGNGSVSVVSIGEDLYWTGNPGYFTEQGETGYIYKFKKCIPFR
Physico‐chemical
properties
protein length:357 AA
molecular weight: 38679,67850 Da
isoelectric point:5,38233
aromaticity:0,11765
hydropathy:-0,08515

Domains

Domains [InterPro]
IPR009091
STR
25–336
IPR009091
IPR009091
STR
27–334
IPR009091
DC_0918
STR
30–152
DC_0918
DC_1778
STR
136–260
DC_1778
XLV07927.1
1 357
Architecture
STR
STR 25-336 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XLV07927.1
1 357
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0048
Central domain 11 207 198 0,1354
C-terminal 208 357 149 0,6973
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-207
C-terminal
208-357

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage SHEFM2K
[NCBI] 		3378341 Viruses >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLV07927.1 [NCBI]
Genbank nucleotide accession
PQ390715 [NCBI]
CDS location
range 93911 -> 94984
strand +
CDS
ATGGGTCATTATATATGCGTGGACGGAAACCAATTATCAAAAATGGGAGTTACTGGTTCATCTTTTTTAGATAGATGGGTTTTATGTCCTTATAGTGTTGATGATTTCTGGAGTTCTTTATATTGTACTATAATTAGAACAAAACAAGGGGAATTGTACTATAGTGGAACTAACTCAGTTTTTGGTATATCATCTTCTGTTTCAACATGGACTCGTTGTGAATCATATTTTGGATCTATTTCTCCGAGTTCAATAAAAGATATAAAAATAACATCATCAACCAGTACTAACAATTCCATGTTAATACTAACAAGTGACGGTCAGTTATATGGTATAGGCATGAATGGTGCAAGTGAATTGGGTACAGCAACTACACCAATTACATCTCCACTCTTAATAGACACTAGTGTATCTGCAATTGCATCTAGTGAAATGAGCAGAAACTTTCACTATATAAAAGATGGTATATATTATCGTTGTGGTGAGAATACTTTTTATCAATTAGGAACCGGTGATAATAATCCTATTACTACTTTTACTGCATTGAATCTTGGTAGTTCTCATGTAATTGCAGTACAAGCTACACGATGGGTAACACGTTTGATTGTTCAAAGTAGTACATCTGCTTTGTCTTTAATGGCGGCTGGTTGGAACACACAGTTGACTATAGGTGGTTCTGAAAATACTGCTATAATAAGGTCATCATTTACTACAAATCCCTATACCGATATAACAGCAAATTCATTCGATAAACTTTCACCAGTATCCTATGTTAATGCAATAAAATCCAGTACTAACATTATTAATACGAATGGTAAGGGATATAATTCTAATGGTGCTGGATTAGGCCGCAACGCATTCTCTGGGAATTATGGTTCAATATTACCAATAGAATTCTTTGATGATAGTGTTGACTTATCACATGTTGAGTGGTTTGGTACGATTGGTAATGGTTCAGTATCGGTAGTTAGTATAGGTGAGGATTTATACTGGACTGGAAACCCTGGGTATTTTACTGAACAAGGTGAGACTGGATATATATATAAATTCAAAAAGTGCATTCCTTTTAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ea2648d936bbb1538a6f3748062c846329be993708a79c77a7c06e69e3444195
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7736
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50