Protein

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Genbank accession
AUR86938.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MSSNLIKQPYEMILDPTGGGGRAKPVANGKFYVGEIDKDPIANPRTDIAYKDESGQERPLTSPLTLNNSGAFVVSKNDGTIIQPYMKDAVGFSVLIQDARGRDVYSDLNTGDPGNIAEAISEYSDIVYKASGGKSSVENMIDSFNLNPLMYAVGTYIKTGGTTFEYLDSTGTVTKDNFRAFDVLNAIDFEKGGSTDFSEAIQAAVDHLGGASGEVVVTDRVECKSIINVASGASVSVTGMIVVDTDFSGDVLFDCATVRHNTKLDIKVTSAAMESVDKIGYVGSLVTTPNIRVVRGGDCRQLKVTGDITGILTRPIETSTGFEYDIHDMNIWGPNLNDADTINTDEDNNLESNRYTCGIFSPSTKDSKMSNVVIVGYNIGACIGSTWVITDFHPWALKSSMIYGLAVFGQHNRGHGIYPDKISKADGRAGVGIYEVTQADRGTTVTTVNNNYYGAVQVIGTYGANYGDVWAVQLGDDGDQYAGTRSKVEFANAAFTTDFPISYPNENIKMINLIGQAQKVNWRTPRYTGIEQPNNFVNEGAIPTQATLPNLLVWAVKHLTGCYGNAKIVSNQNGWINGILIGLNSTAFDSTHNHTLSITTSKNEITNQVYVQLEISSVRKTDIVAKYQYYIQMATWTILYQDNEFYQGVVLGNTVSRPSLYFNGFQYYDTDLNKPIWIIGGTWRDAAGNIA
Physico‐chemical
properties
protein length:691 AA
molecular weight: 75182,06100 Da
isoelectric point:4,86425
aromaticity:0,09696
hydropathy:-0,22533

Domains

Domains [InterPro]
DC_0660
STR
1–691
DC_0660
IPR036730
ATT
2–113
IPR036730
IPR036730
ATT
23–104
IPR036730
IPR009093
ATT
24–102
IPR009093
AUR86938.1
1 691
Architecture
ATT
STR
ATT 1-113 | STR 114-691
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR86938.1
1 691
Domain Start End Length (AA) Confidence
N-terminal 1 196 196 0,9892
Central domain 197 517 322 0,9840
C-terminal 518 691 173 0,9798
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-196
Central
197-517
C-terminal
518-691

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.091.O._10N.286.52.B12
[NCBI] 		1881320 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio lentus
[NCBI] 		136468 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR86938.1 [NCBI]
Genbank nucleotide accession
MG592466.1 [NCBI]
CDS location
range 24858 -> 26933
strand +
CDS
ATGAGTTCAAATTTAATTAAACAACCATACGAGATGATTCTCGATCCAACTGGCGGAGGTGGCAGGGCTAAACCTGTTGCTAACGGTAAATTTTACGTGGGTGAAATTGACAAAGACCCTATCGCTAATCCACGAACTGACATCGCCTACAAGGATGAGTCAGGCCAAGAGCGCCCGTTAACATCACCACTAACCCTGAACAATTCAGGCGCGTTTGTAGTCAGCAAAAATGACGGAACTATCATTCAGCCATACATGAAAGATGCGGTAGGATTTTCTGTTCTTATTCAGGATGCGCGTGGCCGTGATGTTTACTCAGATCTAAACACTGGCGACCCAGGTAATATAGCGGAGGCAATTTCTGAATACTCAGACATAGTTTACAAAGCTTCTGGTGGTAAATCTTCCGTTGAGAATATGATCGATAGCTTTAACTTAAACCCGCTAATGTATGCAGTCGGCACCTATATAAAAACTGGCGGAACAACATTTGAGTACTTAGACTCAACCGGAACTGTAACAAAGGATAACTTTAGGGCTTTTGATGTTTTAAATGCCATTGATTTTGAAAAGGGTGGATCAACAGACTTTTCTGAAGCTATACAAGCAGCGGTAGATCATCTTGGCGGCGCTTCTGGGGAGGTCGTAGTCACCGATCGTGTTGAGTGTAAGTCTATTATCAACGTTGCGTCTGGAGCTAGTGTTTCGGTCACTGGAATGATTGTTGTGGATACTGACTTTTCAGGCGATGTGTTATTTGACTGCGCTACTGTTCGTCATAATACAAAGCTTGATATTAAAGTTACGAGCGCTGCCATGGAGAGTGTTGACAAGATTGGATATGTCGGAAGCTTGGTAACAACTCCAAATATAAGAGTCGTTAGGGGTGGTGATTGTAGGCAGCTAAAAGTTACCGGAGATATCACTGGGATCTTAACTCGTCCAATTGAGACTTCTACGGGCTTTGAATATGATATCCATGATATGAACATTTGGGGGCCAAACCTAAATGACGCTGACACAATAAATACCGATGAAGATAATAACCTAGAATCAAATCGCTACACTTGCGGAATATTTTCACCATCTACAAAAGACTCCAAGATGTCTAATGTAGTTATTGTTGGTTACAACATAGGTGCTTGCATCGGGTCAACTTGGGTTATCACTGACTTCCACCCGTGGGCTTTAAAGTCATCTATGATTTATGGTCTTGCCGTGTTCGGACAGCATAACCGAGGTCATGGCATCTATCCAGACAAGATATCTAAAGCAGACGGAAGGGCGGGTGTTGGAATCTACGAAGTAACTCAGGCTGACAGAGGAACTACAGTAACCACAGTAAACAATAACTACTATGGAGCCGTTCAAGTAATTGGCACGTACGGGGCTAATTATGGTGATGTTTGGGCCGTTCAGCTTGGTGATGATGGCGATCAGTACGCAGGAACTAGAAGTAAGGTTGAATTTGCAAACGCTGCGTTCACTACTGACTTCCCAATTAGCTACCCAAATGAAAACATAAAGATGATCAACTTAATTGGTCAGGCTCAAAAGGTAAACTGGAGAACCCCTAGGTACACCGGAATTGAGCAGCCTAATAATTTTGTTAATGAGGGCGCGATACCAACACAAGCAACATTACCGAATCTGCTAGTATGGGCAGTCAAGCATCTAACAGGCTGCTATGGAAATGCAAAAATAGTAAGTAATCAAAACGGTTGGATTAACGGTATATTAATAGGTTTAAATTCGACAGCATTTGATAGCACCCATAACCATACTCTAAGTATCACCACAAGTAAAAATGAAATAACCAATCAGGTTTACGTTCAACTTGAAATATCTAGCGTAAGAAAGACCGACATCGTAGCTAAATATCAATATTATATCCAGATGGCAACATGGACTATCTTATATCAAGATAATGAGTTTTATCAGGGCGTTGTTCTAGGAAATACAGTATCAAGACCATCATTGTATTTTAATGGGTTCCAGTATTACGACACAGATCTAAATAAGCCAATATGGATTATTGGAGGCACTTGGAGGGATGCGGCGGGTAATATCGCATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
b3fa9a3ff7aa755ef7f773cafc3a75608fd2adb1bbbe2c2c95d80975f4f76f87
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5996
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank