Protein

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Genbank accession
AUE23473.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSSGCGDVLSLADLQTAKKHQIFEAEVITGKSGGVAGGANIDYATNQVTGQAQKTLPAVIADANADFDAQILNMGFTRVGTFAAGATLTNPRQTLLWDVADGGDGQEYGWSGAFPKVVPAASTPASTGGISVGAWISRFDPELRIAVREVLRRSYAETGYNLVAGSFEAGGTVTTATDVLLYESKGKAYSYSGTLPHTVAAGSTPSAEPEVWLDRSDELNAVKQVGAVSIATINTSIAGMADGELTIPPGEYAINGDVIIQLKNNESTTGPFGSFRLNAEGVRFTGSGNIIVDSCKRLTIVGIDAPNHNLILRGCWWSNFEGMRFKYLMLADVAGTAFTSNYWCQWTNCQFQSIKTGAASTFNNKFDWYSCSMRGNANQGFSGPADYAFEFNANANAQAWVFWGGDISYHNIAVYNVGAGNTNGDIELTLDGTYFDTLTPAPINRARSRVQTKKCHYSNSTTSLPNSAKMQAVARGGQDMFRQDRSAGWAQFSAINFIPDGDFRVGLPTYAGAGRPIGASGGAVITEASGAISGRYLNINQAGTSGTTRFRPVPLPFTGRYTAAIIIRNADPGARTIRLGFNNLYEVAEISNTDWTFWTLTVGADIAAGQQPDIQILTNDATPFNVDVCYAAVTFGEGGQPMVAAPAVSELLGSVSYNPPSMATGTGASTTITVNGAELGDFAIPSFGIDLQGIQMWAQVTSANTVTVFFRNETGATIDSLSSTLRVRVVKATYV
Physico‐chemical
properties
protein length:735 AA
molecular weight: 77819,89750 Da
isoelectric point:5,04289
aromaticity:0,09932
hydropathy:-0,07401

Domains

Domains [InterPro]
DC_1596
STR
1–152
DC_1596 G3DSA:2.10.10.80
G3DSA:2.10.10.80
ATT
76–148
G3DSA:2.10.10.80
IPR040775
RBD
80–137
IPR040775
DC_0706
STR
109–735
DC_0706
AUE23473.1
1 735
Architecture
STR
ATT
STR
ATT
STR
STR 1-75 | ATT 76-148 | STR 149-158 | ATT 159-227 | STR 228-735
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUE23473.1
1 735
Domain Start End Length (AA) Confidence
N-terminal 1 229 229 0,9963
Central domain 230 495 267 0,9898
C-terminal 496 735 239 0,9254
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-229
Central
230-495
C-terminal
496-735

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoS_HSE2
[NCBI] 		2053690 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUE23473.1 [NCBI]
Genbank nucleotide accession
MG252615.1 [NCBI]
CDS location
range 1106 -> 3313
strand +
CDS
ATGTCAAGCGGATGCGGTGACGTTTTAAGCCTGGCGGATTTACAGACCGCCAAGAAACACCAGATTTTCGAAGCTGAGGTTATCACCGGTAAATCCGGCGGCGTTGCTGGTGGCGCTAATATTGATTACGCGACAAATCAGGTTACCGGACAGGCACAAAAGACGCTACCGGCTGTTATTGCGGACGCCAACGCGGATTTCGACGCCCAGATTCTGAACATGGGGTTTACTCGCGTCGGAACCTTTGCAGCAGGCGCAACACTTACCAATCCGCGCCAGACTCTGCTGTGGGACGTTGCCGATGGGGGCGACGGCCAGGAATACGGATGGAGCGGCGCGTTCCCGAAAGTCGTACCCGCGGCCAGCACCCCGGCATCAACTGGTGGAATTTCTGTTGGAGCTTGGATTAGCCGATTCGACCCTGAATTACGCATTGCTGTGCGCGAAGTCTTGCGCCGCTCCTACGCCGAGACTGGATATAATCTGGTTGCTGGCAGCTTCGAGGCTGGTGGCACGGTAACGACCGCCACCGATGTGCTGCTATATGAATCGAAAGGCAAAGCCTACTCCTACTCCGGCACTCTGCCGCACACTGTTGCGGCTGGCTCCACCCCCAGCGCAGAGCCGGAGGTGTGGCTTGATAGGAGCGATGAGTTAAACGCCGTCAAACAAGTTGGGGCTGTATCTATCGCAACAATTAACACTTCCATCGCTGGAATGGCGGATGGCGAGCTAACAATACCCCCCGGTGAATACGCAATCAACGGCGATGTGATAATCCAGTTGAAGAACAACGAAAGCACTACCGGGCCTTTTGGGTCGTTTCGCTTAAATGCCGAAGGGGTCCGGTTTACAGGTAGCGGAAATATTATTGTCGATAGCTGCAAGAGACTGACTATTGTCGGTATCGATGCGCCAAATCACAATCTTATTTTGCGCGGTTGCTGGTGGAGCAACTTCGAAGGGATGCGATTTAAATACCTAATGCTCGCTGATGTGGCGGGAACTGCATTTACAAGCAACTACTGGTGTCAGTGGACAAACTGCCAATTCCAATCCATTAAAACTGGCGCGGCTTCAACGTTCAATAATAAGTTTGATTGGTATTCATGCTCAATGCGGGGTAACGCAAACCAAGGTTTTTCTGGCCCAGCAGACTATGCATTCGAGTTCAACGCTAACGCAAACGCACAAGCATGGGTTTTCTGGGGAGGGGATATTAGTTATCACAATATTGCTGTTTACAATGTTGGCGCTGGAAACACAAATGGAGACATTGAGTTGACGTTAGACGGGACGTATTTCGACACGCTGACCCCCGCTCCAATCAATCGCGCTAGAAGCAGAGTTCAAACAAAGAAGTGTCACTACTCAAACAGTACAACAAGCCTTCCGAACTCTGCAAAAATGCAGGCTGTTGCTCGCGGCGGGCAGGATATGTTTCGCCAAGACCGCTCCGCCGGTTGGGCGCAATTCTCAGCCATCAACTTCATCCCTGATGGGGATTTCCGCGTAGGTCTTCCGACTTATGCCGGAGCTGGACGTCCTATCGGAGCATCTGGTGGCGCGGTGATCACCGAAGCGTCCGGTGCAATATCCGGCAGATATCTGAACATCAATCAAGCTGGAACAAGTGGCACCACTCGATTTAGGCCGGTGCCGCTCCCGTTCACAGGCAGATACACCGCAGCAATAATCATCCGCAATGCCGACCCTGGAGCTAGAACAATCCGCCTTGGTTTTAACAATCTTTACGAAGTCGCAGAGATTAGCAACACGGACTGGACTTTCTGGACTCTGACGGTGGGTGCAGACATTGCAGCAGGGCAGCAGCCAGACATCCAAATCCTGACAAATGACGCAACCCCGTTCAACGTTGATGTTTGCTATGCCGCAGTAACATTTGGTGAGGGTGGGCAGCCCATGGTGGCGGCCCCAGCAGTTAGTGAGCTACTTGGGTCTGTGTCGTACAATCCGCCGAGTATGGCGACTGGGACGGGTGCTAGCACGACAATTACAGTAAACGGTGCGGAGCTTGGTGATTTCGCTATCCCCAGTTTCGGGATAGACCTGCAAGGCATTCAAATGTGGGCTCAGGTAACCAGCGCAAATACCGTTACTGTGTTTTTCAGAAATGAAACAGGGGCGACGATAGATTCGTTGTCATCAACATTGCGAGTACGTGTAGTGAAGGCCACGTATGTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6796edc4206c1bd4797a4c0c32ca84556e32a910f2ff60833f21d1479c702d28
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7681
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequence of a Escherichia coli bacteriophage Qin,P. 2022-02-17 — GenBank