Protein

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Genbank accession
NP_839935.1 [GenBank]
Protein name
distal tail protein Dit
RBP type
TSP
Evidence RBPdetect
Probability 0,79
Protein sequence
MTFSVNYNGVELSELVSGFTAIDRGFGSVWNNTLSNQVARYGQSFVKNTLSAKKITITIRKSGIPSDWIALRKELAKVLDVNEPAPLIFGDEPNKVWYAVADGTQALSEDISNLVATGTLTFIVPEGHAYSTYTNVLNSDNSGGVNGSITPNADGSVDITINNQGTLPTWIDLKLTNNHDNGYFGIAGVNGSLELGNREEVDGVTIKHSDILYDSKTDPKFSKFVSAAGQPHPEWAGAGTNGTIGYQEYNYKSSNGQQKTMKGVKLIDPGSQTGFRGGMTELVLPPDSNGDSGAVNFYAWFRLFTWTTVLGQTGVMQILFTDENDNFVAGYGTLKDDKTGNIGTVGFWIGGPNKGQWKHIPYVANNGEQTGLKDNNTMLNDNRGQLDFAKQGATLGFYWKGGHQTIVVPELKDVAIHKVKFFFGNWSTNPRGTMTHMVIRDFWCRKDFVNTWNDLPNRYKNGSVVEIDMASGNVSKDGISAITEVVNGTEPFNIPPGISQIKIIQSSWNNTPPDVEISWKERIL
Physico‐chemical
properties
protein length:524 AA
molecular weight: 57341,34410 Da
isoelectric point:5,47976
aromaticity:0,10305
hydropathy:-0,37118

Domains

Domains [InterPro]
G3DSA:2.40.30.200
ATT
1–130
G3DSA:2.40.30.200
DC_0420
STR
1–524
DC_0420
IPR006520
Unmapped
5–130
IPR006520
IPR008841
STR
34–124
IPR008841
NP_839935.1
1 524
Architecture
ATT
STR
ATT 1-130 | STR 131-524
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
NP_839935.1
1 524
Domain Start End Length (AA) Confidence
N-terminal 1 269 269 0,7569
Central domain 270 468 200 0,0734
C-terminal 469 524 55 0,1003
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-269
Central
270-468
C-terminal
469-524

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactococcus phage 4268
[NCBI] 		201847 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
NP_839935.1 [NCBI]
Genbank nucleotide accession
NC_004746 [NCBI]
CDS location
range 28194 -> 29768
strand +
CDS
ATGACATTTTCAGTTAATTACAATGGTGTTGAACTATCTGAATTAGTAAGTGGATTCACAGCAATTGATAGAGGGTTTGGTTCAGTTTGGAATAATACACTATCAAATCAAGTAGCTAGATATGGTCAATCATTTGTAAAGAATACATTAAGCGCAAAAAAAATTACTATTACCATTAGAAAAAGCGGAATTCCAAGTGATTGGATAGCCTTAAGAAAAGAATTAGCAAAGGTGCTGGACGTCAATGAACCAGCGCCTTTAATTTTTGGTGATGAGCCTAATAAAGTTTGGTATGCAGTAGCAGATGGAACTCAAGCCTTATCAGAAGATATCTCTAACTTAGTTGCTACTGGAACTCTTACATTTATAGTCCCAGAAGGGCACGCTTATTCGACATATACTAATGTTTTAAACTCAGATAATTCAGGTGGAGTCAATGGTTCTATCACTCCTAATGCTGATGGTTCGGTTGATATCACAATTAATAATCAAGGAACATTACCGACTTGGATTGATTTAAAGCTTACCAATAATCATGACAATGGGTATTTTGGTATTGCTGGGGTTAACGGAAGCTTAGAATTAGGTAATCGAGAAGAAGTTGATGGTGTTACTATCAAGCATAGCGATATTCTTTATGATAGTAAAACTGATCCTAAATTTTCTAAATTTGTATCAGCCGCAGGTCAACCCCATCCAGAATGGGCTGGTGCAGGAACAAATGGAACAATTGGGTATCAAGAATATAATTATAAGTCTTCCAATGGGCAACAGAAAACAATGAAGGGTGTTAAGTTGATTGATCCTGGAAGTCAGACAGGATTTCGTGGGGGCATGACAGAGCTTGTGTTACCACCAGATTCAAATGGGGATTCTGGTGCAGTTAATTTCTATGCTTGGTTCAGATTATTTACTTGGACAACTGTTCTCGGCCAAACTGGGGTGATGCAAATTCTATTCACTGATGAAAATGATAATTTTGTGGCTGGTTATGGGACATTAAAGGATGATAAAACAGGAAATATTGGGACTGTTGGATTTTGGATTGGCGGACCTAACAAAGGGCAATGGAAACATATTCCTTATGTCGCAAATAATGGAGAACAAACTGGATTAAAAGATAATAATACGATGCTTAATGATAATCGAGGGCAATTAGACTTCGCTAAACAAGGAGCAACTCTTGGTTTTTATTGGAAAGGTGGCCATCAAACAATTGTAGTTCCAGAACTTAAAGATGTCGCAATTCATAAGGTTAAGTTCTTCTTTGGGAACTGGTCAACTAACCCAAGAGGAACGATGACACATATGGTTATTCGTGACTTTTGGTGCCGCAAAGACTTTGTTAATACATGGAATGACTTACCAAATCGCTATAAAAATGGCTCAGTCGTTGAAATTGATATGGCTAGTGGTAATGTATCCAAAGATGGAATATCAGCCATTACAGAGGTAGTAAATGGAACAGAACCTTTCAATATTCCACCTGGAATTAGTCAGATCAAAATCATTCAATCATCTTGGAATAATACACCACCAGACGTTGAAATATCATGGAAAGAAAGGATTTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d667ffd4991016a8f79e62dfde9fc8134951ce4365aa992944072381b55c83ab
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8507
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Sequence analysis of an obligately lytic P335 bacteriophage 4268 Trotter,M., Ross,R.P., Fitzgerald,G. and Coffey,A. 2006-01 — GenBank