Protein
View in Explore- Genbank accession
- CAK6598536.1 [GenBank]
- Protein name
- structural protein with Ig domain
- RBP type
-
TSP
- Protein sequence
-
MEETMPTINVLVAPYVVRNKPETERGHVVTGVAKGWQKTSLNQDPDEILTECKGLDALLTKSNLEADGVTKIDPSKPVGFLVSYEIHDPSAVLTTGLTITPATANGEIGQVVELLATVAPANATYKGVNWYSGDVTKAVHIGGGKFKLLQSGSVTVYGVTVEGNHVDSTVITVAGALSLSTDLTATKDVTSGEDATFSVVAAGGTTPYTYAWYFSDVPGGAGSVIDAGTNATASTANLVVTAVDASDEGEYWCVVSDADGHSVTSTRCEMAVV
- Physico‐chemical
properties -
protein length: 273 AA molecular weight: 28263,19970 Da isoelectric point: 4,46791 aromaticity: 0,06227 hydropathy: 0,06703
Domains
Domains [InterPro]
DC_0400
STR
3–273
STR
3–273
G3DSA:2.60.40.1080
STR
90–174
STR
90–174
IPR007110
STR
168–264
STR
168–264
IPR003599
STR
184–273
STR
184–273
PF13927
STR
187–256
STR
187–256
IPR036179
RBD
188–266
RBD
188–266
1
273
Architecture
STR 3-273
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
273
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 212 | 212 | 0,5677 |
| Central domain | 213 | 262 | 51 | 0,4014 |
| C-terminal | 263 | 273 | 10 | 0,9858 |
Note: Constraints were applied during segmentation.
C-terminal too short, adjusted boundary
C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-212
1-212
Central
213-262
213-262
C-terminal
263-273
263-273
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Klebsiella phage vB_Ko_K5lambda5 [NCBI] |
3071641 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
CAK6598536.1
[NCBI]
Genbank nucleotide accession
OY978873
[NCBI]
CDS location
range 109293 -> 110114
strand -
strand -
CDS
GTGGAGGAAACCATGCCAACAATCAATGTATTAGTCGCGCCGTATGTTGTACGCAACAAACCGGAGACCGAACGTGGTCATGTTGTTACCGGGGTTGCCAAGGGCTGGCAGAAAACCAGTCTGAACCAAGACCCGGACGAAATTCTGACCGAATGTAAAGGTCTTGATGCACTGCTGACCAAATCTAATCTGGAAGCAGACGGCGTGACCAAAATCGATCCTTCGAAGCCCGTTGGCTTCCTGGTATCTTACGAAATTCATGATCCCAGCGCAGTCCTGACTACTGGTCTGACTATCACCCCGGCAACCGCCAATGGTGAAATTGGACAGGTGGTTGAACTTCTGGCGACGGTGGCCCCGGCGAATGCGACCTATAAAGGCGTCAACTGGTATTCCGGTGACGTGACTAAAGCGGTCCATATCGGCGGCGGTAAATTCAAACTGCTTCAGTCCGGTTCCGTTACCGTCTATGGCGTCACCGTAGAAGGCAACCATGTCGATTCAACCGTCATCACTGTTGCGGGCGCTTTGTCTCTTTCAACCGATCTGACGGCAACTAAAGACGTCACCAGCGGTGAAGACGCGACATTTAGCGTTGTCGCTGCGGGCGGCACTACCCCGTACACTTATGCGTGGTATTTCTCTGATGTGCCGGGTGGCGCAGGTTCGGTTATTGACGCTGGCACCAACGCGACTGCATCAACCGCTAACCTGGTTGTGACTGCTGTGGATGCTTCCGACGAAGGCGAATATTGGTGTGTTGTTTCTGACGCCGATGGCCATTCAGTGACTTCTACCCGTTGCGAAATGGCTGTAGTCTAA
Genome Context
Genome Context
Tertiary structure
PDB ID
3b198d09f29ff5c3233cda4d5798611439e1759e44fc0641cea367381c07b8eb
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50