Protein

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Genbank accession
QDH92342.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSTVHTQTELDAAIAAKEPTIYIESAAGVWLTIQSSGSSHVVARGSSHVEARDGSHVEARDGSHVEAWDGSHVVAWDGSHVVAWDGSHVEAWDGSHVVAWGSSHVEARDGSHVEAWDGSHVVAWDGSHVEAAKYTAVHLHSQRVELDASGAVIDMTAVDLTDPVAWCEVRGVTVEDGIAYVYKAVNDKWTTDRGVDYSPGSLPEAADWRRTGDCGNGLHFGVTPSHSADYFRQATRFVRVGVRLDECEPLGDKIKARRVVVPCIEVDRRGREVEAIREGTPA
Physico‐chemical
properties
protein length:282 AA
molecular weight: 30517,14110 Da
isoelectric point:5,21358
aromaticity:0,07092
hydropathy:-0,31773

Domains

Domains [InterPro]
IPR056083
RBD
181–261
IPR056083
QDH92342.1
1 282
Architecture
RBD
RBD 181-261 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QDH92342.1
1 282
Domain Start End Length (AA) Confidence
N-terminal 1 138 138 0,2137
Central domain 139 271 134 0,3464
C-terminal 272 282 10 0,9957
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-138
Central
139-271
C-terminal
272-282

Taxonomy

  Name Taxonomy ID Lineage
Phage Gordonia phage Spooky
[NCBI] 		2591210 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDH92342.1 [NCBI]
Genbank nucleotide accession
MK937597 [NCBI]
CDS location
range 44554 -> 45402
strand +
CDS
ATGAGTACCGTCCACACTCAAACAGAACTTGACGCCGCAATCGCCGCGAAAGAGCCGACCATCTACATCGAATCCGCCGCCGGCGTGTGGTTGACGATCCAGTCATCGGGCAGTTCCCACGTCGTAGCGCGGGGCAGTTCGCACGTCGAAGCGCGGGACGGTTCGCACGTCGAAGCGCGGGACGGTTCGCACGTCGAAGCGTGGGACGGTTCGCACGTCGTAGCGTGGGACGGTTCGCACGTCGTAGCGTGGGACGGTTCGCACGTCGAAGCGTGGGACGGTTCGCACGTCGTAGCGTGGGGCAGTTCGCACGTCGAAGCGCGGGACGGTTCGCACGTCGAAGCGTGGGACGGTTCGCACGTCGTAGCGTGGGACGGTTCGCACGTCGAAGCGGCGAAATACACTGCCGTGCATCTGCACTCACAGCGCGTCGAACTGGACGCTTCCGGTGCTGTCATCGACATGACTGCTGTCGACCTCACCGATCCTGTCGCCTGGTGCGAGGTGCGCGGAGTCACAGTTGAGGACGGTATCGCCTACGTGTACAAAGCGGTCAACGATAAGTGGACGACCGATCGTGGTGTCGACTATTCGCCTGGTTCCCTCCCTGAGGCTGCGGATTGGCGGCGTACCGGCGACTGCGGGAATGGCCTGCATTTCGGTGTGACGCCGTCGCACTCGGCCGACTACTTCCGTCAGGCGACGCGTTTTGTGCGGGTCGGTGTGCGTCTGGATGAGTGTGAACCGTTGGGCGACAAAATTAAGGCTCGGCGGGTCGTGGTGCCTTGTATTGAGGTTGACCGTCGCGGACGTGAGGTTGAGGCAATCCGCGAAGGAACACCAGCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
1ef201703539be5e7aaea50f4ffe4be4d0b4aee7b3639b947733b5adc9e9a1d3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8853
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50