Protein

View in Explore
Genbank accession
WDR22488.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MNQLFSQGGKGSAGILTNKQAVARHFGVKQSEIVYFSVGVDISGYKVIYDKTTQRAYSLPIGIPAGTTAISLSTAAVLVHSQGSVDLGAVAVLRKEYVTIPGDFTSGATIQVKNEILTHSNGAQYRWAGAVPKVVPAGSTPASSGGISASAWIEVTGEELRDELATTGGASQIGTSDGKTVQQWIIANDSANYRARNIQKLAWVDKQVHSRGSIKVLFQGDSMTAGYDTTSTDRVPANNGDWATHASMTYPQRFMAYLPEQSGCSVTGIYRAISGHTAIQSYNEPSWQSNPNCDVVILMLGLNDAGGVAGTTEDIYMEYMEKLIRRFIDWGMGVVVQTCSTGGQGSGGIVANLWAKRMRMMADTYGCAHFNADEVQYYRHNGAVQSDGGHFNSMGYAIHGQMLASMFMAGGLLPTYRPLTNEINTWCGRLDDSIGYCDATGNVNLGRSDGAYTRTKVVGGMVANAASIATFSFYLDAEAAHIFVHGSGAGPVNVLVDAPSWWSNGAQDYYDFANNQTINFSNSPQAANNAIVDLSTTYSADRKFVGRILGRGWKTLTFFTRLDGTGGDFYLNSLTVQPVPVGMSVQARNWARFDKGHRAVYSKKIPQPYNQASLPAAAALVNFQVPMPQSMLPTTPSISGDLGSNFYNCGHSVLKISNTNGDYLEVLLIKTTGGGYVFTGKILKTTYATENQPTAITATAAHYSMKDLKVAGANGPNMPLETIRDIDMASYVTIGVGAGNGGLVLDINITWPSTPPTSYWNIELEAWDMFGNSEASI
Physico‐chemical
properties
protein length:777 AA
molecular weight: 83267,56690 Da
isoelectric point:6,21275
aromaticity:0,09653
hydropathy:-0,14003

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
ATT
1–96
G3DSA:3.30.2020.50 G3DSA:2.10.10.80 SSF52266
DC_1596
STR
1–324
DC_1596 DC_0640
IPR040775
RBD
94–156
IPR040775 IPR036514
cd00229
ENZ
216–405
cd00229
IPR013830
ENZ
220–398
IPR013830
WDR22488.1
1 777
Architecture
ATT
STR
RBD
ATT 1-167 | STR 168-411 | RBD 412-777
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WDR22488.1
1 777
Domain Start End Length (AA) Confidence
N-terminal 1 194 194 0,9440
Central domain 195 436 243 0,6182
C-terminal 437 777 340 0,7428
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-194
Central
195-436
C-terminal
437-777

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SenP_UTK0001
[NCBI] 		3028910 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WDR22488.1 [NCBI]
Genbank nucleotide accession
OQ359891.1 [NCBI]
CDS location
range 58374 -> 60707
strand -
CDS
ATGAATCAGTTATTTAGTCAAGGTGGTAAGGGTTCTGCTGGAATCTTAACCAATAAACAAGCAGTAGCTAGACACTTTGGAGTTAAACAGTCTGAGATTGTTTATTTCTCTGTTGGTGTTGATATCTCTGGGTATAAAGTAATTTATGACAAGACCACGCAAAGAGCTTACTCCTTACCTATTGGTATTCCTGCTGGTACTACTGCCATCAGTCTTAGTACTGCTGCTGTACTTGTACATTCACAAGGTTCTGTAGACCTTGGAGCAGTAGCTGTTTTGCGTAAAGAGTATGTGACTATTCCGGGTGACTTTACTTCTGGTGCAACCATTCAAGTTAAGAATGAAATTCTTACCCATTCTAATGGCGCTCAATATCGTTGGGCAGGAGCAGTACCTAAAGTAGTTCCTGCTGGCTCAACCCCTGCTTCAAGTGGAGGTATTAGTGCATCAGCATGGATTGAAGTTACTGGTGAAGAGTTACGAGATGAATTAGCTACTACTGGTGGTGCATCCCAGATTGGTACGTCTGATGGTAAAACTGTACAACAGTGGATTATTGCTAATGATTCAGCAAACTACCGTGCACGTAATATCCAGAAATTAGCTTGGGTAGATAAGCAAGTTCATAGTCGTGGTTCAATCAAAGTATTGTTCCAAGGTGACTCAATGACTGCTGGTTACGATACTACATCTACTGACCGTGTTCCTGCTAACAATGGGGATTGGGCTACCCATGCTAGTATGACCTATCCTCAACGTTTTATGGCTTACTTACCAGAACAATCAGGTTGTAGTGTTACTGGTATATATCGTGCTATTTCAGGACATACAGCAATTCAGTCATACAATGAACCATCATGGCAATCCAATCCTAACTGTGATGTTGTTATTTTAATGTTAGGTCTGAACGATGCTGGTGGTGTTGCTGGAACTACTGAAGATATTTATATGGAGTATATGGAAAAACTCATCCGTCGCTTCATTGATTGGGGTATGGGTGTAGTTGTCCAGACTTGCTCTACTGGTGGTCAGGGTTCTGGTGGTATTGTTGCTAACCTGTGGGCAAAACGTATGCGTATGATGGCTGATACGTATGGTTGTGCTCATTTCAATGCTGATGAAGTTCAGTACTATCGTCATAATGGTGCTGTTCAATCTGACGGTGGTCACTTTAACTCTATGGGTTATGCGATTCATGGTCAGATGTTAGCATCCATGTTTATGGCAGGTGGTTTGTTACCAACCTACCGTCCACTCACTAATGAGATTAATACTTGGTGTGGTCGTTTAGACGATAGCATTGGCTATTGCGATGCTACTGGTAATGTTAACTTAGGCCGTTCTGATGGTGCATATACTCGTACTAAAGTTGTGGGTGGTATGGTTGCTAATGCTGCAAGTATTGCAACATTTAGTTTTTATTTAGATGCAGAAGCAGCACATATTTTTGTACATGGTAGTGGTGCTGGTCCAGTGAACGTTCTTGTTGATGCTCCTAGTTGGTGGAGTAATGGTGCACAGGATTATTATGATTTCGCTAATAACCAGACCATTAATTTTTCTAACTCACCTCAAGCAGCGAATAACGCCATTGTTGACCTGAGTACTACATATTCAGCAGATAGAAAATTTGTTGGTAGAATTTTAGGTCGTGGCTGGAAAACTCTTACCTTCTTCACTAGGTTAGATGGTACTGGTGGGGACTTTTATCTTAACTCTTTAACTGTACAGCCAGTACCTGTAGGTATGTCTGTTCAAGCACGTAATTGGGCTAGATTTGATAAAGGTCATCGTGCTGTTTATTCTAAAAAAATTCCGCAGCCATACAATCAAGCATCTTTACCTGCGGCTGCTGCATTAGTTAATTTTCAAGTACCAATGCCACAAAGTATGCTTCCTACTACTCCATCTATCTCTGGGGATTTAGGTAGTAATTTCTATAACTGTGGGCATTCTGTACTTAAAATTAGTAATACTAATGGGGATTATTTAGAGGTCTTATTAATTAAGACTACTGGTGGCGGGTATGTATTTACAGGTAAAATCCTTAAAACTACTTATGCTACAGAAAATCAGCCAACGGCTATTACTGCAACTGCGGCTCATTATAGTATGAAGGACCTTAAAGTTGCTGGGGCTAATGGTCCTAATATGCCATTAGAAACCATACGAGATATTGATATGGCTTCCTATGTCACTATTGGTGTAGGTGCAGGGAATGGTGGACTTGTTTTAGATATTAATATAACGTGGCCTTCTACTCCTCCAACTTCATACTGGAATATTGAGTTAGAAGCTTGGGATATGTTTGGTAACTCTGAAGCATCCATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1477684e9299a50bac41e84809da08e3764f8412f79cfec79b003894e4c4755a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5741
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of a Diverse Collection of Salmonella Phages Isolated from Tennessee Wastewater Bryan,D.W., Hudson,L.K., Wang,J. and Denes,T.G. — — GenBank