Protein

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Genbank accession
XYO02671.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSLVNGMVESLNNTKSETEIGIGGYRLFARVRETVNYRNIVPTDTLEDGSNSTDDIINEPITISIEGVVSNLFVEERQYPQLVSKDFSSVGEVTALLPAKSQQQIQRISQIDSQIRDAVLAAERAERLAGKPYEFFGNSGNSAKTEQEKFIDFMEALYFSRQPTEVSVNFRDYKNMALVSFIPVRDNNTKDTRFTADFQQINYSTLVYTPVSSPSKSVSGKVSDASNKGGQNPESNETGERSLLSSLIGG
Physico‐chemical
properties
protein length:250 AA
molecular weight: 27650,33830 Da
isoelectric point:4,81349
aromaticity:0,08000
hydropathy:-0,46600

Domains

Domains [InterPro]
DC_0601
STR
1–250
DC_0601
IPR048494
ATT
31–211
IPR048494
XYO02671.1
1 250
Architecture
STR
ATT
STR
STR 1-30 | ATT 31-211 | STR 212-250
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VpM-PP270
[NCBI] 		3384823 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYO02671.1 [NCBI]
Genbank nucleotide accession
PV883422.1 [NCBI]
CDS location
range 9188 -> 9940
strand +
CDS
GTGAGTTTAGTTAATGGAATGGTCGAATCTCTAAACAACACAAAATCCGAAACTGAAATCGGGATTGGCGGGTATCGCCTCTTTGCAAGAGTTAGGGAGACGGTTAATTATAGAAATATCGTTCCAACAGATACCCTTGAGGATGGGTCAAACTCAACGGATGACATCATAAATGAACCTATAACGATTTCCATCGAAGGCGTTGTAAGCAACCTGTTCGTTGAGGAAAGACAATACCCGCAACTGGTAAGTAAGGATTTCTCATCTGTCGGTGAAGTAACCGCACTTCTTCCAGCAAAAAGCCAGCAACAGATACAGAGAATTAGTCAAATTGACTCACAGATAAGGGATGCGGTTTTAGCAGCGGAGCGAGCGGAAAGATTAGCTGGCAAGCCGTATGAGTTTTTTGGCAATTCAGGAAATTCAGCAAAAACCGAACAGGAGAAGTTTATTGATTTCATGGAGGCTTTATATTTTTCAAGACAGCCAACGGAAGTTTCAGTAAATTTCAGAGACTACAAAAATATGGCTTTAGTCAGCTTCATTCCGGTTCGTGACAACAACACCAAGGACACGAGATTTACCGCTGATTTTCAGCAAATAAATTACTCAACTTTGGTTTACACTCCGGTATCAAGCCCATCAAAATCAGTTTCCGGTAAGGTTTCGGATGCATCAAATAAAGGTGGACAGAATCCAGAATCTAACGAAACCGGAGAGAGATCATTACTTAGCAGCTTGATAGGTGGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
14570c5b2e356047fb55c8277eb4b611b584e1513a7f89cf197d88fff8f6e939
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6349
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50