Protein

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Genbank accession
QKN86180.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MDLGFRLSKLKLSNVFRDFKKDVESNFKEIDKLLTELLDIKSKTSNKYLDSLIDTLFTKRYDQLQKEIRAIVLPEMSPLAITEDYEKSLSDLKGERHTSLKSRLDADLNQIKSQSQKTANDDRFIVTENGTIFADFVKKSKTIKSAKKIGIIGDSVAKGSRASKNFGKYLSEKLGATVQNEAVSGATMSTVKANSIYEQAAKIRGMDLVIIQGTDDDWLYNGSTGVQIGTSKTNEKTFYGAFCKTVELIKSNNPKAKILVMTATRQLPVNGTTIRRKDTDKNSLGLDLEAYVNAQVLACSELNVPVFDAYHTDLLDPYNPAFRVKNMVDGLHPNV
Physico‐chemical
properties
protein length:335 AA
molecular weight: 37343,20490 Da
isoelectric point:9,06775
aromaticity:0,07164
hydropathy:-0,41821

Domains

Domains [InterPro]
DC_0665
ATT
8–112
DC_0665 SSF52266
IPR036514
STR
144–335
IPR036514
SSF52266
STR
145–334
SSF52266
cd00229
ENZ
149–334
cd00229
IPR013830
ENZ
152–334
IPR013830
QKN86180.1
1 335
Architecture
ATT
STR
ATT 8-112 | STR 142-335
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus virus pSp_SNUABM-S
[NCBI] 		2736347 No lineage information
Host Staphylococcus pseudintermedius
[NCBI] 		283734 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QKN86180.1 [NCBI]
Genbank nucleotide accession
MT423824.1 [NCBI]
CDS location
range 163 -> 1170
strand +
CDS
ATGGATTTAGGCTTTAGACTTAGCAAGTTAAAGTTATCTAATGTGTTTCGTGATTTTAAAAAAGATGTTGAAAGTAATTTTAAAGAAATTGATAAGTTACTAACTGAGTTACTCGACATTAAAAGCAAAACGAGTAATAAATATTTGGACAGTTTGATTGATACACTTTTTACTAAACGATATGATCAACTGCAAAAAGAAATCAGAGCAATTGTGTTGCCTGAAATGTCCCCTCTTGCAATTACAGAGGATTATGAAAAGAGTTTAAGTGATTTAAAAGGAGAACGACATACATCACTCAAATCACGATTAGATGCAGATTTAAATCAAATTAAAAGTCAATCTCAAAAGACTGCTAATGATGATAGATTTATCGTGACTGAAAACGGTACAATCTTTGCTGATTTTGTTAAAAAGTCAAAGACAATCAAAAGTGCTAAAAAAATTGGGATTATCGGCGATTCTGTTGCAAAAGGTAGTAGAGCTAGTAAAAATTTTGGTAAATACCTGTCTGAAAAGTTAGGTGCTACTGTACAGAATGAAGCGGTAAGCGGTGCTACTATGTCAACAGTAAAGGCTAATTCTATTTATGAGCAAGCTGCAAAAATTAGAGGAATGGATTTAGTTATCATTCAAGGGACCGATGACGACTGGTTGTATAACGGCTCGACAGGTGTTCAAATTGGAACAAGTAAAACAAACGAAAAAACGTTTTACGGTGCTTTTTGTAAAACAGTTGAATTGATTAAGTCTAACAATCCTAAAGCAAAAATATTAGTGATGACAGCAACACGTCAATTACCTGTCAACGGTACCACAATCAGACGTAAAGACACAGATAAGAATAGTCTAGGGCTTGATTTAGAAGCGTATGTAAATGCGCAAGTGCTTGCATGTTCAGAACTTAATGTACCCGTTTTTGATGCGTATCACACAGACTTGTTAGACCCTTACAATCCGGCATTTCGTGTTAAAAACATGGTTGATGGATTGCATCCTAATGTTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
a5c3adfc1abdd35680784b31f95eb226442f187a4c7f60ed97e02cfd4ed7796b
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7958
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Two novel bacteriophages control multidrug- and methicillin-resistant Staphylococcus pseudintermedius biofilm Kim,S.G., Kwon,J. and Park,S.C. — — GenBank