Protein

View in Explore
Genbank accession
WYW03335.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MADEFLASNEFPGDGVTTLFNVAFKGNRPDAESGTVPYINASDVKAQQITPATATSPESAIDLTCTPVGPNQFNVTPVVPTGKIVRIYRATQDEYNLVDYQSLQTVGEADLDLANRQSLFIVQEAHDLAVRASEDAQDANTVAFGAVAVANAAAADAATALDTANQALGASSAAVSIATDAAEAADAAEAHASAADAAAAAAQVAADNAEAASAAAVATANAAASDAATALATANGISATANQALTNSNTAIATANAAEATANAIAGTANSALSAASSAVSIANAANDTANGIAATADTALDNSVEALDTANDALALVVNKQNLNDNLTALSGLTGAADRVPYFTGLGALSLANFTAYGRSLAALTDSAGLKALANIPGRNVLINGAMMVANRGASVTVPDSTGLYGGPDRWICVNSAGGGMSQYISTSSGADPIPTIVQQVTATPTDLSTTHYLGGIQQRIEGYNARKLVGKALTLSFLFQANINGVYSVALRGGTTPQSWISTFNYTGGGAPQRFSFAIPAVPSAMNVVGNNSIGMELHIGAQNNGTYSTTTLGWQAGTFMKFNASTGWSSTVGNYISAGEVQLEIGPKSDYEHEDISVTLTRCQRYFEVILGTTDPGQGAYIIRPYKVGKRAQATITLTGGSLSGANFDAFAGVYGCRAPAAVVATGQSDFTLWVDAEL
Physico‐chemical
properties
protein length:682 AA
molecular weight: 69095,44370 Da
isoelectric point:4,38447
aromaticity:0,06452
hydropathy:0,08123

Domains

Domains [InterPro]
DC_1152
ATT
13–209
DC_1152 DC_0568
IPR005604
ATT
74–130
IPR005604
WYW03335.1
1 682
Architecture
ATT
STR
ATT 13-209 | STR 230-682
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PpuP-Kadastiku
[NCBI] 		3132659 No lineage information
Host Pseudomonas putida KT2440 and
[NCBI] 		1481724 Heterolobosea > Eutetramitea > Lyromonadida > Psalteriomonadidae > Monopylocystis >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WYW03335.1 [NCBI]
Genbank nucleotide accession
PP496455.1 [NCBI]
CDS location
range 35875 -> 37923
strand +
CDS
ATGGCTGATGAATTTCTAGCGTCCAACGAATTCCCCGGCGACGGTGTGACGACTCTGTTCAACGTAGCGTTCAAGGGCAACCGCCCCGACGCTGAGTCGGGCACTGTTCCGTACATCAACGCCTCGGATGTCAAGGCGCAGCAGATTACTCCGGCCACGGCGACTTCGCCAGAATCCGCCATTGATCTGACCTGCACCCCAGTTGGTCCGAACCAGTTTAACGTAACACCTGTCGTGCCAACCGGCAAGATCGTAAGGATCTACCGCGCCACGCAGGACGAATACAACCTTGTCGATTACCAGTCCCTGCAAACCGTAGGTGAGGCTGACCTCGACTTGGCCAACCGTCAATCGCTGTTCATCGTACAGGAGGCACACGACCTCGCGGTGCGTGCCAGTGAAGATGCACAGGACGCAAACACTGTAGCCTTCGGCGCTGTGGCTGTGGCTAACGCCGCTGCTGCCGATGCGGCCACTGCACTTGACACGGCTAACCAAGCCCTCGGTGCGTCATCCGCTGCCGTCTCTATCGCTACCGATGCTGCTGAAGCCGCCGACGCTGCCGAGGCCCACGCCTCTGCTGCTGACGCTGCCGCTGCTGCCGCACAGGTCGCTGCCGACAATGCCGAAGCTGCGTCTGCTGCCGCTGTAGCCACGGCCAACGCCGCTGCCTCTGACGCCGCTACTGCTCTGGCTACTGCCAACGGTATCTCGGCTACGGCCAACCAAGCGTTGACCAACTCCAACACTGCAATCGCTACCGCGAACGCAGCAGAGGCCACAGCTAACGCCATTGCCGGTACGGCGAACTCTGCGCTTTCCGCAGCCTCGTCTGCTGTCTCCATCGCGAACGCCGCCAACGACACCGCCAATGGCATCGCCGCGACTGCTGACACTGCGTTGGACAACTCCGTTGAAGCCCTCGATACTGCTAACGACGCGCTGGCCCTTGTGGTCAACAAGCAGAACCTGAACGACAACCTGACTGCACTCTCTGGCTTGACTGGGGCTGCGGATCGCGTGCCGTACTTCACTGGCTTGGGTGCCCTGTCGCTGGCGAACTTCACTGCGTATGGTCGCTCGCTGGCTGCGCTGACCGACTCCGCTGGGCTGAAGGCTCTCGCCAACATCCCCGGCAGGAACGTGCTTATCAACGGCGCAATGATGGTTGCAAACCGAGGGGCTAGCGTAACTGTACCGGACTCAACAGGCCTGTACGGCGGACCTGACCGCTGGATCTGCGTCAACTCGGCTGGCGGTGGGATGTCTCAGTATATCTCGACGTCTTCCGGAGCTGACCCTATCCCTACGATTGTACAGCAAGTGACCGCCACGCCAACTGACTTATCAACCACCCATTACTTGGGCGGGATTCAGCAGAGGATTGAAGGCTATAACGCACGGAAGCTGGTAGGTAAGGCACTCACACTGTCGTTTCTGTTTCAGGCCAACATTAACGGGGTATACTCAGTAGCGCTGCGTGGCGGCACAACGCCGCAGTCGTGGATTAGTACGTTCAACTACACAGGAGGCGGCGCTCCACAACGTTTCTCTTTTGCCATCCCTGCTGTCCCATCTGCGATGAACGTAGTCGGTAACAACAGCATTGGCATGGAGCTGCACATTGGTGCGCAGAATAACGGAACTTACAGCACCACTACACTCGGGTGGCAGGCTGGTACGTTCATGAAGTTCAACGCCTCCACCGGGTGGAGCAGCACCGTCGGGAACTACATCTCCGCTGGTGAAGTCCAACTGGAGATCGGGCCGAAGTCGGACTACGAGCACGAGGACATCAGCGTTACACTGACCCGGTGCCAGCGGTATTTCGAGGTTATCTTGGGTACTACTGATCCCGGCCAAGGCGCCTACATTATTCGACCTTACAAGGTAGGCAAGCGGGCGCAGGCGACTATTACCCTAACAGGTGGTAGCCTTTCAGGTGCTAATTTCGATGCATTTGCAGGCGTGTACGGCTGCCGCGCACCGGCGGCTGTAGTCGCAACGGGGCAGTCGGACTTCACCTTATGGGTTGACGCGGAGCTTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
feb8393ff804fdac1c69ed2dc1908364309924351bb8379ac75b94155f092fed
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7580
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of a phage collection against Pseudomonas putida Brauer,A., Rosendahl,S., Kangsep,A., Rikberg,R., Lewanczyk,A.C., Horak,R. and Tamman,H. — — GenBank