Protein

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Genbank accession
CBA17786.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,72
Protein sequence
MTALDSLKLAKSKLETIIDAEKTPHRTTLDEYHSVIRTIESIEDFETPDGTFTLTDLHKVALSRFLAVGLSRTVRTSNAGVFDILPAGLTFGPERIVITFLHIESVNGNPNVYTFRSKGVSIAEFASKTTIAFPIGNELFFPENGGLSVELSNADETTITLCYYIQNTNTLTPSIITPLTKDFDGISWLDVDSSTALSNAAIASARIDVLISNASEGIILETGGRTFGTALYVTNGSLYLEAGRGNRTGSRNDNAFIEYELPEDPTNLILEFTINAPQGIAALYANGMRIGYDDSWSNDYLGGSNPGRVGDIASVVRETQSGGNVPLSNAVVTFAEVYRDAEITL
Physico‐chemical
properties
protein length:345 AA
molecular weight: 37255,18130 Da
isoelectric point:4,54686
aromaticity:0,08406
hydropathy:-0,03101

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CBA17786.1
1 345
Domain Start End Length (AA) Confidence
N-terminal 1 174 174 0,5447
Central domain 175 334 161 0,2073
C-terminal 335 345 10 0,9813
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-174
Central
175-334
C-terminal
335-345

Taxonomy

  Name Taxonomy ID Lineage
Phage Acaryochloris phage A-HIS1
[NCBI] 		645116 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Acaryochloris marina
[NCBI] 		155978 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CBA17786.1 [NCBI]
Genbank nucleotide accession
FN436268 [NCBI]
CDS location
range 40327 -> 41364
strand +
CDS
ATGACAGCCCTCGACTCTCTTAAGTTAGCGAAATCGAAACTCGAAACGATAATCGACGCCGAGAAGACGCCACACCGTACGACTCTCGACGAATATCATTCCGTAATCCGTACGATAGAGTCTATCGAAGACTTCGAAACACCGGACGGAACCTTTACGCTAACTGACCTTCACAAAGTTGCTTTATCTCGCTTTCTCGCGGTAGGACTATCGAGGACTGTCCGAACTTCTAACGCTGGCGTATTCGATATTCTTCCGGCAGGCTTAACGTTTGGCCCGGAGCGCATCGTAATTACTTTTCTACATATCGAAAGCGTAAACGGAAACCCTAACGTCTACACTTTTCGCTCAAAAGGCGTAAGCATTGCAGAATTCGCCTCGAAAACGACGATAGCCTTTCCGATAGGCAATGAGTTATTCTTTCCTGAAAACGGCGGCTTATCGGTCGAGTTATCGAACGCTGACGAGACTACAATAACGTTATGCTATTACATTCAAAACACGAATACGCTTACACCATCGATAATCACACCGTTAACGAAAGATTTCGACGGTATTTCGTGGCTCGACGTAGACTCGTCTACCGCTTTATCTAACGCTGCGATCGCAAGCGCCAGGATCGACGTATTAATCTCGAATGCCTCCGAAGGAATTATTTTAGAAACGGGCGGACGAACTTTCGGAACGGCTTTATATGTGACTAACGGATCGTTATACCTCGAAGCCGGGCGCGGAAACCGAACCGGATCACGAAACGATAACGCCTTTATAGAATACGAATTACCCGAAGACCCTACGAATCTTATCCTCGAATTCACAATTAACGCTCCGCAAGGTATAGCCGCTTTATACGCAAACGGAATGCGTATAGGATACGATGATTCATGGAGCAACGATTACTTAGGCGGATCGAATCCGGGCCGCGTTGGCGACATAGCATCCGTCGTCCGCGAAACGCAAAGCGGCGGAAACGTGCCGCTATCGAACGCTGTCGTAACGTTTGCGGAAGTTTACCGAGACGCCGAAATAACCTTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
ae8188028fc09ad6b99d4b7f497c8ab235c0dc364cd915467a8333883a6b3201
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6757
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic and proteomic characterisation of two siphoviruses infecting the facultative epibiont Acaryochloris marina, a chlorophyll d-producing marine cyanobacterium Chan,Y.W., Mohr,R., Millard,A.D., Holmes,A.B., Wheatley,P.J., Larkum,A.W., Hess,W.R., Mann,N.H., Scanlan,D.J., Whitworth,A.L. and Clokie,M.R.J. 2015-02-11 — GenBank