Protein

View in Explore
Genbank accession
YP_009820485.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,82
Protein sequence
MFETRVKGRYTVTHMKATGEVLAQHTFDNLITNAGLDWICAMDTSDLFSQAMAVSTSTADPNPSAPSLPEEVRRTTSYAPGGDVTSGLDGEWIYWHKRWRFPIGTLTGQVLATVGIVAQSEVGFESNTGAKIPAGTPLSYTRIKDAAGQPTTLVVQADEILDVQYELRSKAVAMAEAKFVISGVERTIRLTPLPFANRRNLYGERYIYYNESPRIDGKNASGADVQDGQWVKLYPRYTRGTYKGQLMLRATVDNGNMPGGITGCKDLKIYNGRNYALTIDPPVVKNNTQEFSITMEFSVARA
Physico‐chemical
properties
protein length:302 AA
molecular weight: 33267,22280 Da
isoelectric point:7,70347
aromaticity:0,09272
hydropathy:-0,33113

Domains

Domains [InterPro]
DC_1185
STR
1–302
DC_1185
YP_009820485.1
1 302
Architecture
STR
STR 1-302
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage RLP
[NCBI] 		2483418 Uroviricota > Caudoviricetes > Autographivirales > Krylovirinae > Phikmvvirus
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009820485.1 [NCBI]
Genbank nucleotide accession
NC_048168.1 [NCBI]
CDS location
range 23186 -> 24094
strand +
CDS
ATGTTTGAGACGCGAGTTAAGGGTCGCTACACGGTGACCCATATGAAAGCCACGGGTGAAGTCCTGGCGCAACACACCTTCGACAACCTCATCACTAACGCAGGTCTTGATTGGATTTGCGCCATGGATACCTCTGACCTGTTCTCCCAGGCCATGGCCGTGAGTACCAGCACTGCGGACCCCAACCCCTCTGCACCCTCCCTACCGGAGGAAGTACGGCGGACCACTTCGTACGCCCCTGGCGGGGATGTGACTTCGGGCCTGGATGGGGAGTGGATTTACTGGCACAAGCGGTGGCGCTTCCCGATAGGTACTCTGACCGGACAGGTCCTCGCTACCGTGGGTATCGTGGCCCAATCCGAAGTAGGCTTTGAGAGTAACACCGGGGCGAAGATTCCGGCAGGTACTCCACTATCCTACACCCGGATCAAAGACGCCGCCGGCCAACCCACCACCCTGGTAGTTCAGGCTGACGAGATTCTCGACGTACAGTATGAGCTGCGCAGCAAGGCTGTGGCGATGGCCGAGGCCAAGTTCGTGATCTCCGGGGTTGAGCGTACCATCCGCCTCACACCGCTGCCCTTCGCTAACCGGCGTAACCTCTACGGTGAGCGCTACATCTACTACAACGAGAGTCCACGGATCGACGGCAAGAATGCGTCCGGTGCTGATGTCCAAGACGGTCAGTGGGTGAAGCTGTACCCGCGATATACTCGCGGCACCTACAAGGGTCAGCTTATGCTACGGGCCACCGTAGATAACGGCAACATGCCAGGGGGTATCACCGGCTGTAAGGACCTAAAGATTTACAATGGGCGGAACTACGCACTCACCATCGACCCTCCAGTAGTCAAGAACAACACTCAGGAGTTCTCCATTACAATGGAGTTCTCAGTGGCGAGGGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
59b605c63dd6b07d0dd5c42a926f309e85becd1ccb9c0d93b2513a92af689b2f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8127
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic Characterization And Animal Model Therapeutic Studies of Bacteriophage RLP, with a Unique Feature of Plaque Enhancement after treating at High Temperatures Alvi,I.A., Asif,M., Tabassum,R., Abbas,Z. and Rehman,S.U. 2020-04-03 — GenBank