Protein

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Genbank accession
AND75611.1 [GenBank]
Protein name
tail collar protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,85
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MVRKVFNDGDILYAEDVNIIGQPFVDGQDLLGHGLKVDDNSLSDEPQNIKTRFYAWYNRFRVTVQSGLTLSVTQGSISVSGNIISFPPQTINAIDNANSFVWIGKTDADPAIALRVSQTLPNVCIPLARVIAASGSVTSVTDLRDVSVDILPPSIPDAVPVGSTIISLIPPTAPIPAGYLELLNSSQNVSRTTYSALFALWGTYYGNGDGSTTFGVPGTGGRFLRLGGSGLSVGDIGGSNQITIPTNALPSHQHGIPANTHTHSVNDGGHGHTINQTPHSHSISDPGHAHGVPFGAAVDNGNNAFDTGGSPYNNGIGTTQNQTGISVNTANANLSINTSSTGISIQSASTGLTVTSNAGNGQAFQHDQPYLVFRVFVKV
Physico‐chemical
properties
protein length:379 AA
molecular weight: 39526,25940 Da
isoelectric point:5,63140
aromaticity:0,06860
hydropathy:-0,08734

Domains

Domains [InterPro]
DC_0891
STR
20–379
DC_0891
IPR037053
ATT
152–219
IPR037053
SSF88874
STR
157–275
SSF88874
IPR011083
ATT
175–223
IPR011083
AND75611.1
1 379
Architecture
STR
ATT
STR
STR 20-151 | ATT 152-223 | STR 224-379
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AND75611.1
1 379
Domain Start End Length (AA) Confidence
N-terminal 1 365 365 0,5229
Central domain 366 368 4 0,0032
C-terminal 369 379 10 0,9954
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-365
Central
366-368
C-terminal
369-379

Taxonomy

  Name Taxonomy ID Lineage
Phage Nostoc phage A1
[NCBI] 		1775256 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Nostoc sp.
[NCBI] 		1180 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AND75611.1 [NCBI]
Genbank nucleotide accession
KU234533 [NCBI]
CDS location
range 27253 -> 28392
strand +
CDS
ATGGTACGTAAAGTTTTTAATGATGGTGATATTCTTTACGCGGAAGATGTAAATATTATAGGTCAACCGTTTGTTGACGGACAGGATTTATTAGGGCATGGTCTGAAAGTTGATGATAACTCATTATCGGATGAACCTCAAAATATTAAAACTCGTTTTTACGCGTGGTATAATCGCTTTCGAGTAACTGTACAAAGCGGTTTAACACTTTCGGTCACTCAGGGTAGTATCAGTGTTTCAGGAAACATTATAAGCTTTCCTCCACAAACTATAAACGCCATAGATAACGCAAACAGTTTTGTCTGGATAGGCAAAACCGATGCAGATCCGGCGATCGCATTAAGAGTTTCACAAACTTTGCCAAACGTTTGCATACCGTTAGCCCGTGTCATTGCTGCAAGCGGTTCTGTAACATCGGTAACAGATTTACGTGATGTCTCAGTTGATATTTTACCCCCTTCCATACCGGACGCTGTTCCTGTAGGTTCTACTATTATTTCATTGATACCTCCTACAGCGCCTATACCGGCTGGATATTTAGAATTGTTGAATAGTTCTCAGAATGTTTCTAGAACCACTTACAGCGCTTTATTTGCTTTATGGGGTACATATTACGGCAATGGTGACGGATCTACAACTTTTGGTGTTCCTGGCACAGGAGGACGCTTTTTAAGGCTAGGTGGTTCGGGTTTGTCTGTCGGTGATATTGGGGGAAGTAATCAAATAACTATTCCCACAAACGCTTTGCCATCACACCAACACGGTATACCAGCTAACACACATACTCATAGTGTAAATGACGGTGGTCATGGTCACACAATCAACCAAACACCACATAGTCATAGCATTAGTGATCCGGGTCATGCTCATGGTGTTCCGTTTGGTGCTGCTGTTGATAATGGTAATAACGCTTTTGACACTGGTGGCAGTCCTTACAATAATGGTATAGGAACTACACAAAATCAAACGGGTATTTCTGTAAATACTGCTAATGCCAATTTAAGTATTAACACCTCTAGTACTGGTATCAGCATACAAAGCGCTAGTACGGGTTTGACAGTAACTAGCAACGCCGGAAACGGACAAGCTTTCCAACATGATCAACCATATTTAGTTTTTCGAGTGTTTGTAAAAGTTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
82bb883adfa9b10e4ee68e3672a1f678725ef55f671e2bfedb08563fde0988cf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6894
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50