Protein

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Genbank accession
YP_007006975.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MQMRYWLRLDNMQYEISGDDMTPWGFIEVPKKPDPHQEIYAWDINKWDWVISEQLARGAIALSRYERETAGITFNGNQFHTTDRSKTMLCGAAIKCLRDENKTFHWKTSDGQFIELSSTDILALHDAVIDYVESCFSREQSLVNSLLQNELIAEMIDEGWPSNNL
Physico‐chemical
properties
protein length:165 AA
molecular weight: 19197,36050 Da
isoelectric point:4,69322
aromaticity:0,10909
hydropathy:-0,48545

Domains

Domains [InterPro]
DC_2197
STR
4–164
DC_2197
IPR025484
STR
56–149
IPR025484
YP_007006975.1
1 165
Architecture
STR
STR 4-164 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage ZF40
[NCBI] 		1127516 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pectobacterium carotovorum
[NCBI] 		554 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007006975.1 [NCBI]
Genbank nucleotide accession
NC_019522.1 [NCBI]
CDS location
range 45348 -> 45845
strand +
CDS
ATGCAGATGCGTTACTGGTTACGTCTGGACAATATGCAGTATGAAATTAGCGGTGATGACATGACGCCGTGGGGGTTTATTGAAGTCCCTAAAAAACCCGATCCACATCAGGAAATTTACGCATGGGATATTAATAAATGGGATTGGGTTATTAGCGAGCAGTTAGCGCGCGGTGCTATTGCGTTGTCTCGCTACGAGAGAGAAACGGCGGGAATTACATTTAATGGCAATCAATTCCACACAACAGATCGCAGCAAAACAATGCTGTGTGGGGCGGCGATTAAATGCCTGCGTGACGAAAATAAAACCTTCCACTGGAAAACCAGTGACGGTCAATTTATTGAGTTGTCATCGACTGATATTCTCGCGCTGCATGATGCTGTAATTGATTACGTTGAATCCTGTTTTAGTCGTGAGCAATCATTAGTCAATTCACTACTACAAAATGAATTAATCGCGGAAATGATCGACGAAGGTTGGCCGTCGAACAACCTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d5444d1fe13cfdda66f8c6be43e2ad940c4a00784120018e3a1c8d07c947845d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8338
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50