Protein

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Genbank accession
UPT53906.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MKVISGGIPGRPQHTTGAGDLYSKLHKIAYARAIQLEDTDQLTSSLGEEIKAKVVSNYKALNDKLSEHIAKEGPQHGETLKSLGLSMVNDFPLTHWSHIVEGEVYNEYVTPKTLNDALHQVDYGIVPDLLGVGRFNLNYVDSLRGMGNWIWNSGESGGTQAWERGSVIGYLGGCAYLGYPIRGSSTSLLIDAYPGAKQVQGLRQVGSLFGPNTLNAYGWNAIGYVETSSWKPPVFVNFQSFPFGEEYGAAMHDQGDVTATANHLTWLDPNIDSDCFGGVISANLNGIRFGLVNTKPAVQKYNVGINGSNFFGWGCDIIQDPNVFKYTFEGNTSTDKLISVPWETLTGKTGIVFDHVGEVHGGFEWIERGRELFIFLSVNLSDADGNKHTAFFGWVANLRNLKAVTITRLNTPFDWSTSAVPSLPTEHPFHPVNGAGLLRTQGGHSNIYTHNMTSMVLEHVHEISSLKEVYDRCLELPDLPVATELRLNIGMAPMHLGSAQGRMFLMNDHTMVNGQFNGSGEWTFYRQEWHDGMFWTGSTHLPWKPPSATRLISEFKEFNQECVNTINSNGEVQLTGLVWSTENLHEAIGTVRGVVGKGMMGKVAHLTESSRTAIEKDHKAFLVDNDYNAYACVMVYPVGNDYQGLGMRCDQQGNVEVAKLEVSKVGDDYQVSKVGDYQNIYQSEGPVNGPGNLRRFLKRDFYVHLNGNDVPKITIKHPLMDRTLILRIAVGPTFTVEETYAPEPNEVGLTLFHIVMPTTYGPMMPVPGGLSGFYRLGDYSVDGSHVAYPDRYVYLANPNDTVTIKGRNYAIPPGFSWNYESSSKANCSFTLKDGELYPLGTAQEVNGGLHYEKP
Physico‐chemical
properties
protein length:854 AA
molecular weight: 94319,96380 Da
isoelectric point:5,65925
aromaticity:0,10656
hydropathy:-0,30000

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UPT53906.1
1 854
Domain Start End Length (AA) Confidence
N-terminal 1 432 432 0,3088
Central domain 433 642 211 0,4341
C-terminal 643 854 211 0,5768
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-432
Central
433-642
C-terminal
643-854

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage phiKT1019
[NCBI] 		2863680 Viruses >
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UPT53906.1 [NCBI]
Genbank nucleotide accession
MZ622713 [NCBI]
CDS location
range 79252 -> 81816
strand +
CDS
ATGAAAGTCATAAGTGGTGGTATTCCGGGTAGACCCCAACATACCACGGGTGCAGGTGATCTGTATTCTAAGTTGCACAAAATAGCTTATGCGCGCGCTATTCAACTGGAAGACACTGATCAACTTACATCTAGCCTTGGTGAGGAGATTAAAGCAAAAGTAGTCAGTAACTACAAAGCGTTGAACGACAAACTAAGTGAACACATTGCTAAAGAAGGACCTCAGCACGGAGAAACCTTAAAGTCCCTTGGTCTGAGCATGGTTAACGACTTCCCGCTCACCCACTGGTCCCATATCGTCGAAGGTGAAGTTTACAATGAGTACGTTACTCCTAAGACTTTGAACGATGCGTTACACCAAGTGGATTACGGGATTGTCCCTGATCTGTTAGGAGTGGGTCGTTTTAACCTTAATTACGTCGACTCATTGCGTGGCATGGGTAACTGGATTTGGAACTCTGGTGAGAGTGGTGGGACTCAGGCTTGGGAACGTGGTAGTGTGATTGGTTACCTCGGTGGCTGTGCATATCTAGGTTATCCTATTCGTGGGTCCAGTACTTCACTGTTGATTGACGCTTACCCGGGTGCTAAACAAGTTCAAGGCTTGCGTCAAGTAGGGAGCTTGTTTGGTCCTAACACCTTAAACGCTTACGGTTGGAACGCTATTGGTTACGTAGAGACATCCAGCTGGAAACCACCAGTGTTTGTAAACTTCCAAAGCTTCCCTTTTGGTGAAGAATACGGAGCAGCCATGCACGACCAAGGTGATGTTACCGCTACCGCTAACCACCTTACTTGGTTAGACCCAAACATCGACAGTGATTGTTTCGGTGGTGTGATCTCCGCTAACCTTAATGGTATTCGTTTTGGTCTGGTGAACACAAAACCTGCTGTACAAAAATACAACGTAGGTATCAATGGCTCTAACTTCTTTGGTTGGGGATGTGATATTATCCAAGACCCTAATGTGTTTAAGTACACATTCGAAGGGAACACCAGTACCGATAAACTGATCAGTGTTCCTTGGGAAACCTTGACAGGTAAGACCGGTATCGTGTTTGACCACGTTGGTGAAGTTCATGGTGGGTTTGAATGGATTGAACGTGGACGTGAGTTGTTTATCTTCTTAAGCGTAAACCTAAGTGACGCGGATGGTAATAAACATACAGCGTTCTTTGGTTGGGTAGCTAACCTACGTAACCTTAAAGCAGTAACCATCACTCGACTTAACACGCCGTTTGATTGGTCTACTTCAGCAGTACCGAGCTTACCTACGGAACATCCATTCCATCCGGTTAATGGCGCTGGTTTGTTAAGAACACAAGGTGGTCACTCCAACATCTATACTCACAACATGACGTCTATGGTGTTAGAACATGTTCACGAAATCTCTTCATTAAAAGAGGTTTATGATCGTTGTCTAGAACTTCCAGACTTACCGGTGGCTACTGAACTTCGTTTGAACATCGGCATGGCTCCTATGCATTTAGGTAGCGCTCAAGGTCGAATGTTCTTGATGAATGATCACACCATGGTGAATGGTCAGTTCAATGGCTCGGGTGAGTGGACGTTCTATCGTCAGGAATGGCATGATGGGATGTTCTGGACCGGTAGTACTCACCTGCCTTGGAAGCCGCCTTCTGCAACTCGTTTGATCTCTGAGTTCAAAGAGTTTAACCAAGAGTGTGTGAATACCATCAACTCTAATGGAGAAGTCCAGCTTACCGGTTTGGTGTGGTCGACTGAAAACCTCCATGAGGCGATCGGTACGGTACGTGGTGTGGTTGGTAAGGGAATGATGGGTAAGGTTGCCCATTTGACTGAATCATCGCGTACGGCCATCGAGAAGGACCATAAGGCGTTCCTAGTTGATAACGATTACAATGCTTATGCTTGTGTGATGGTTTATCCGGTAGGTAACGATTACCAAGGTCTGGGGATGCGTTGTGACCAACAAGGTAATGTGGAAGTAGCGAAGTTAGAAGTAAGTAAGGTGGGGGACGACTACCAAGTAAGTAAGGTTGGTGATTATCAGAACATCTACCAAAGCGAAGGTCCAGTTAATGGTCCGGGTAACTTACGTCGTTTCTTGAAACGAGACTTCTACGTGCACCTAAATGGTAATGATGTTCCTAAGATTACCATTAAACACCCTCTAATGGACCGTACGTTGATTTTACGCATTGCAGTAGGACCAACGTTCACCGTAGAGGAAACTTACGCTCCTGAGCCTAATGAGGTCGGTTTAACATTATTCCACATTGTTATGCCTACGACGTATGGTCCTATGATGCCGGTACCGGGTGGTTTATCAGGTTTCTATCGTTTGGGTGATTACTCAGTAGATGGAAGTCATGTTGCTTATCCAGACCGTTATGTGTACTTAGCCAACCCTAATGACACGGTAACCATCAAAGGTCGTAACTACGCAATACCTCCGGGTTTCAGTTGGAACTATGAGTCCAGTTCAAAAGCTAACTGTAGCTTCACGTTAAAAGACGGTGAACTGTATCCATTAGGAACAGCTCAAGAAGTGAACGGTGGGTTGCATTACGAAAAACCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
62c340bd87cdef519479f72df6ec7f10805ecd5e3c6fa6d7d2625df41e9ee822
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3295
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50