Protein

View in Explore

UniProt accession

A0A8S5USJ4 [UniProt]

Protein name

YadA-like protein

RBP type

TSP

Evidence DepoScope

Probability 1,00

Protein sequence

MRIVRENVMTFYFIHLKRKLNMKKSLIALSIVAALTAQANAENLVDGKFNTITGDQNIVTGAGNAVTGTDLAVEGDSNTAAGIHGTVAGKLNVVAGHENIVNGNQSVVMGPHAKGIANIVTAVGSDTYVGAYSGSAYGKGATVGDDGDAGTAVGAHALVAKASGVAVGFHANALGGQSTALGSGTKAIGDQSTAVGVGAISEGRFTTAVGQNAKATNNHDVAIGSGSVTEAAVGTINAEVNGTKFGNFAGHKPKAELSVGSKGFERTITNVAAGRVAAASTDAVNGSQLYAVADKVAENAKGVKANADAVKALDGKVAQNAKDIVSLNGDLTAVKDDVAINANKIAGNSEQIGNLNKAVEAQNAWNTAQDQQIADNKAVVEAADAKHTTWNENQDKAIAGLQNGVASNTDRINNLTELVRGVSSSEARLKQEIHDARREARAGIAGANAIAAIPQPHAPGQTSIGAGAGYFKHEGAIALGVAHISKSGKWVSKAGVNFDTRKNVGAAVGVSYVFGGVPVVVPQPTVVKEVVREVIVREVQPAPAATKIRG

Physico‐chemical properties

protein length:	550 AA
molecular weight:	55640,53000 Da
isoelectric point:	8,88879
aromaticity:	0,03818
hydropathy:	-0,06818

Domains

Domains [InterPro]

IPR011049
STR
32–122

IPR011049 IPR011049 G3DSA:1.20.5.170 G3DSA:3.30.1300.30

IPR048518
Unmapped
40–103

IPR048518 IPR011049 G3DSA:3.30.1300.30

IPR011049
STR
44–145

IPR011049 IPR011049 IPR005594

cd12820
STR
93–218

cd12820 DC_1045

IPR008640
Unmapped
173–199

IPR008640 IPR008640 IPR008635

IPR045584
RBD
282–514

IPR045584

A0A8S5USJ4

1 550

Architecture

STR

RBD

ATT

STR 32-379 | RBD 380-453 | ATT 454-515 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR011049	STR	IPR011049	32	122	Merged direct domain	Serralysin-like metalloprotease, C-terminal	Central	Low	Positional only	81 proteins / 81 hits
IPR048518	Unmapped	-	40	103	InterPro	Ice-binding protein, beta roll	-	-	-	-
IPR011049	STR	IPR011049	44	145	Merged direct domain	Serralysin-like metalloprotease, C-terminal	Central	Low	Positional only	81 proteins / 81 hits
cd12820	STR	DC_0258	93	218	InterPro cluster	cd12820	Central	Low	Positional only	46 proteins / 51 hits
IPR011049	STR	IPR011049	129	270	Merged direct domain	Serralysin-like metalloprotease, C-terminal	Central	Low	Positional only	81 proteins / 81 hits
IPR011049	STR	IPR011049	136	294	Merged direct domain	Serralysin-like metalloprotease, C-terminal	Central	Low	Positional only	81 proteins / 81 hits
IPR011049	STR	IPR011049	150	290	Merged direct domain	Serralysin-like metalloprotease, C-terminal	Central	Low	Positional only	81 proteins / 81 hits
IPR008640	Unmapped	-	173	199	InterPro	Trimeric autotransporter adhesin YadA-like, head domain	-	-	-	-
IPR008640	Unmapped	-	203	227	InterPro	Trimeric autotransporter adhesin YadA-like, head domain	-	-	-	-
DC_1045	STR	DC_1045	255	379	Novel HMM	DC_1045	Central	Low	Positional only	12 proteins / 12 hits
IPR008635	RBD	DC_0221	268	310	InterPro cluster	Trimeric autotransporter adhesin YadA-like, stalk domain	C-terminal	Medium	Text match	14 proteins / 17 hits
G3DSA:1.20.5.170	STR	G3DSA:1.20.5.170	271	314	Merged direct domain	G3DSA:1.20.5.170	Central	Low	Positional only	8 proteins / 8 hits
IPR045584	RBD	IPR045584	282	514	Merged direct domain	Pilin-like	C-terminal	Low	Positional only	5 proteins / 5 hits
G3DSA:3.30.1300.30	RBD	G3DSA:3.30.1300.30	393	514	Merged direct domain	G3DSA:3.30.1300.30	C-terminal	Low	Positional only	62 proteins / 62 hits
G3DSA:3.30.1300.30	RBD	G3DSA:3.30.1300.30	400	515	Merged direct domain	G3DSA:3.30.1300.30	C-terminal	Low	Positional only	62 proteins / 62 hits
IPR005594	ATT	DC_0200	454	514	InterPro cluster	Trimeric autotransporter adhesin YadA-like, C-terminal membrane anchor domain	C-terminal	Medium	Text match	43 proteins / 43 hits

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout

N-terminal

Central

C-terminal

A0A8S5USJ4

1 550

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	15	15	0,0010
Central domain	16	433	419	0,7154
C-terminal	434	550	116	0,2415

Note: Constraints were applied during segmentation.
Fixed 44 C-terminal predictions appearing before Central domain

Legend: N-terminal Central domain C-terminal

3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring

N-terminal
1-15

Central
16-433

C-terminal
434-550

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Myoviridae sp. ctijX18 [NCBI]	2825154	Uroviricota > Caudoviricetes >
Host	No host information

Coding sequence (CDS)

Genbank protein accession

DAF97372.1 [NCBI]

Genbank nucleotide accession

BK016133 [NCBI]

CDS location

range 4819 -> 6471
strand +

CDS

ATGAGAATAGTTCGGGAAAACGTAATGACGTTTTACTTTATCCATCTAAAAAGGAAATTAAACATGAAAAAATCTCTGATCGCTTTGTCTATCGTAGCTGCCCTGACTGCACAAGCTAACGCTGAAAATCTGGTAGACGGTAAATTCAACACCATAACCGGTGACCAAAACATCGTCACTGGTGCAGGTAATGCCGTTACCGGTACTGACCTCGCTGTAGAAGGTGATTCCAATACTGCCGCTGGTATCCATGGTACTGTAGCAGGTAAGTTGAACGTAGTTGCAGGTCATGAAAACATCGTGAATGGTAACCAAAGCGTGGTAATGGGTCCTCACGCTAAAGGCATTGCAAACATCGTGACTGCAGTTGGTAGCGATACCTACGTTGGTGCCTACTCTGGCTCTGCTTATGGTAAAGGCGCAACTGTAGGTGACGATGGCGATGCCGGTACGGCTGTAGGTGCTCATGCTCTGGTTGCTAAGGCTTCTGGTGTAGCCGTAGGCTTCCACGCTAACGCATTGGGCGGTCAATCTACTGCTCTGGGTAGTGGTACTAAAGCCATTGGTGACCAATCCACTGCCGTAGGTGTAGGTGCCATCAGTGAAGGTCGTTTCACTACTGCTGTTGGTCAAAACGCTAAAGCCACTAACAACCATGACGTAGCCATCGGTAGCGGTTCTGTTACTGAAGCTGCTGTAGGTACTATTAACGCTGAAGTGAATGGTACTAAATTCGGTAACTTCGCTGGTCACAAACCTAAAGCTGAATTATCTGTAGGCTCTAAAGGTTTTGAACGTACCATCACTAACGTAGCTGCTGGTCGTGTGGCTGCTGCTTCTACCGATGCTGTAAATGGCTCTCAACTCTACGCTGTTGCAGATAAAGTTGCCGAAAATGCTAAAGGTGTCAAAGCGAATGCTGATGCAGTAAAAGCTCTGGATGGCAAAGTAGCGCAAAACGCTAAAGACATCGTGAGCTTGAATGGTGACCTGACCGCTGTGAAAGACGACGTAGCGATCAATGCTAACAAAATCGCCGGTAACAGCGAACAAATTGGTAACCTGAATAAAGCAGTAGAAGCGCAAAACGCATGGAACACTGCTCAAGACCAACAAATTGCCGACAACAAAGCTGTGGTAGAAGCTGCCGATGCAAAACACACTACTTGGAATGAAAACCAAGACAAAGCCATCGCTGGCTTGCAAAATGGTGTGGCATCCAATACCGATCGCATCAACAACCTGACTGAACTGGTACGTGGTGTATCTAGTAGTGAAGCTCGCCTGAAGCAAGAAATCCATGATGCTCGACGTGAGGCTCGTGCTGGTATCGCTGGTGCGAACGCCATTGCTGCTATCCCTCAACCTCATGCACCTGGTCAAACCTCTATCGGTGCAGGTGCTGGTTACTTCAAACACGAAGGTGCCATTGCATTGGGTGTAGCACATATCAGCAAATCCGGTAAATGGGTTTCTAAAGCCGGTGTGAACTTCGATACCCGCAAAAACGTAGGTGCCGCCGTTGGCGTATCTTACGTATTCGGTGGTGTACCGGTTGTCGTACCTCAACCTACTGTGGTTAAGGAAGTAGTACGAGAAGTCATTGTACGTGAAGTACAACCTGCTCCTGCTGCTACTAAAATCCGTGGCTAA

Genome Context

Gene Ontology

	Description	Category	Evidence (source)
GO:0019867	outer membrane	Cellular Component	IEA:InterPro (UniProt)
GO:0015031	protein transport	Biological Process	IEA:UniProtKB-KW (UniProt)

Tertiary structure

PDB ID

f232e5b489a3558c68afeffab4e87481590e72b7c4f8bc64f775923044343ec3

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,8411

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

3D Structure with Domain Coloring

Domain Coloring

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Gene Ontology

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence