Protein

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Genbank accession
UCR92153.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAVGEIQINALPEASLPLRLADIMHLKEGVEDRRATLGDVLYPHTSRSDNPHGVTKNQVGLGNVLNELQLIKSNNLEDVPDKAVARQNLEILSADEVAQAVAEHANRVDNPHNVTKTQVGLGNVLNVSQLERAQNLADVPNKATARQNLGVLSSDEVQQAIGNHIDDKNNPHGVTKNQVGLGNVQNWSETHIYTENNNTKYVAADALYKLYKAIQDQYPVGSTVISYNAANPSTYLLCGGVWVLASKGRCLVGYDDRNAGRAVGSQFGAATVTLNVNNLPSHSHAVTLTGGAHNHTASASATNAGNHAHSTYIGSHSHSFSGTTSTFDYGTKNTNTTGAHSHTIELDRGDRGFGRAEQASEGLERRANTSTEGNHYHTVAIGAHNHTVSGNTSAFDYGSKTSNTTGDHTHAITVSVANNNSHTHSGNTNATGGGAAFSVEQPSEVVYIWRRTA
Physico‐chemical
properties
protein length:453 AA
molecular weight: 48219,98040 Da
isoelectric point:6,27505
aromaticity:0,05077
hydropathy:-0,52892

Domains

Domains [InterPro]
DC_1039
STR
1–134
DC_1039 SSF88874
DC_0782
STR
127–453
DC_0782
IPR053827
ATT
217–320
IPR053827
UCR92153.1
1 453
Architecture
STR
ATT
STR
STR 1-216 | ATT 217-320 | STR 321-453
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UCR92153.1
1 453
Domain Start End Length (AA) Confidence
N-terminal 1 206 206 0,9926
Central domain 207 405 200 0,0110
C-terminal 406 453 47 0,9942
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-206
Central
207-405
C-terminal
406-453

Taxonomy

  Name Taxonomy ID Lineage
Phage Listeria phage LPML1
[NCBI] 		2880887 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Listeria monocytogenes
[NCBI] 		1639 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UCR92153.1 [NCBI]
Genbank nucleotide accession
OK283618.1 [NCBI]
CDS location
range 14495 -> 15856
strand -
CDS
ATGGCAGTAGGTGAAATTCAAATTAACGCCTTGCCGGAGGCTTCCCTCCCTTTGCGTTTAGCTGATATCATGCACTTAAAAGAAGGTGTTGAAGATAGACGTGCAACACTTGGTGACGTACTCTACCCACACACCTCAAGAAGTGATAACCCTCACGGTGTTACTAAAAATCAGGTTGGTTTAGGTAATGTGCTGAATGAACTGCAACTAATCAAGTCTAATAACTTGGAAGACGTTCCAGATAAAGCAGTTGCAAGACAGAACTTAGAAATCCTTTCAGCAGATGAAGTTGCTCAAGCTGTGGCTGAACATGCTAACCGTGTAGATAACCCACATAACGTTACAAAGACTCAAGTTGGTTTAGGTAACGTATTGAACGTTTCTCAGTTAGAACGTGCTCAGAACTTAGCAGATGTACCTAATAAGGCAACTGCAAGACAAAACTTGGGAGTTCTTTCATCAGATGAAGTTCAACAGGCAATTGGTAATCACATTGATGATAAGAACAACCCTCATGGTGTTACTAAAAATCAGGTTGGTCTAGGTAATGTCCAAAACTGGTCAGAGACCCACATCTACACTGAAAACAATAACACTAAGTATGTTGCAGCAGATGCTCTTTACAAACTTTACAAAGCTATTCAAGACCAGTATCCAGTTGGTAGCACAGTAATCTCTTACAATGCTGCTAACCCATCTACATACCTCCTGTGTGGCGGTGTATGGGTACTTGCTTCTAAAGGTAGATGTTTGGTAGGGTATGATGATAGAAACGCTGGAAGGGCTGTAGGTTCACAATTTGGTGCAGCAACTGTTACACTGAATGTTAATAACTTACCTTCTCATAGTCACGCAGTTACTTTGACAGGTGGCGCTCATAACCATACTGCTTCTGCTTCTGCTACTAATGCTGGTAACCATGCTCACTCAACCTACATTGGTTCTCACTCCCACTCTTTCAGTGGTACTACAAGTACGTTTGACTATGGTACTAAGAACACTAACACAACTGGTGCTCACTCCCATACCATTGAACTTGATAGAGGTGATAGGGGTTTTGGTAGAGCAGAACAGGCAAGTGAAGGTTTAGAAAGACGTGCCAATACAAGTACAGAGGGTAACCACTATCATACTGTGGCAATTGGTGCTCATAACCATACAGTAAGTGGTAATACTTCTGCATTTGATTATGGTTCAAAAACCTCCAACACGACTGGTGACCATACTCACGCAATCACAGTTTCAGTTGCAAATAATAACAGCCATACACATAGTGGTAACACTAATGCTACAGGTGGTGGTGCTGCTTTTTCTGTAGAGCAACCTTCCGAAGTAGTTTATATCTGGCGTAGAACAGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a8f67d46acfc6683fbb05517e5b76c220095f482c3727eb3b1cbd48548757c02
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7358
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50