Protein

View in Explore
Genbank accession
DBA08477.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,60
TF
Evidence RBPdetect2
Probability 0,97
Protein sequence
MGAVHQHLAGRKGGSSKPKQPVEAPDSLRSVAMAKILLAVGEGEFAGVPSERDIYLDNTPLMDPSGNLNFPNVKWEWRAGSVDQDYIPGIPAVENETSVNVELRSDTPWVRSLSNIQLSAVRLRFAWPALQQQDTNGNIGGYRIEYAVDLATDGGAYQEVLREAVDGKTTTRYERSRRIDLPAATNGWQVRVRRLTPNQNNNRIADTMLIAGYTEVIDAKLRYPNTALLYVEFSAEQFSNIPAVTVDCRGRKVQVPSNYDPETRAYLGIWDGTMKQAWTDNPVWHTYDIVTNDRFGVGKRIKAWMVDRWEMYRISQYCDQLVPDGKGGQEPRHTCNLNLQSRAGAWELLRDLTAIYRGMAYWAQGQLKIQADIPRATDVDFAYTRANVIDGRFSYGSASERTRYSRALVSYDNPANNYDTDVAVATDKRLQRRYGDNPVEVAAIGCTRESEAQRRGKWAILTNSQDRTVTFRTGMDGAIPLPGWVIPVADALLAGREIGGRVSAVAGRVITLDRDTQAKAGDRLLLNLPSGKAEARTVQSVTGRAVTVTTAYSETPLPELVWTLDADDLAVPLYRVMKVSQPERGVFEITALQYEPGKFSAIDTGAKLESRPISVIPITTVAPPASVTLTSHYQFDQGLAVSTMTIAWPAVEGAVAYDVEWKKDSGNWIRLPRTGTTSVDVTGIYAGGYLARVRAVSAFDITSVWKSSILTQLSGKTGAPPALAFLRTTSGPWKIGLEWGFPASGAADTAYTEIQQSVTPGGSEQNATALGLFAYPTDTHTLTSLAAGARLAFRGRLIDRTGNVGPWSAWVDGISSTDASEYNELITKEYVESALGEQFFADIDQMQVDISGLQGQIDNLSDVLAYDPTKTYAKNDIVRVGNRLYQAKQAVPLNASPPNASYWADIGQSIETANGLAQQVATNTADITELDGKVEAAASSLDVLQAAARREPATGEKADALKGWDTIARAATEVTVRANEDEAQAKRTSLLEARTVTAEGRIATVESVVASNNAVTVQRLDQLSGQVASNASAISTEQTVRANADSALGQRMDTVSARTDTNEANIQTTSQAVTSLDGNVKALYSVKLQAHANGQKYAAGWQLGFDSGTSVTTMAFQADRFLWFNSSSGQTVAPVSIVGGQMFINNAMIQEGSITNAKIGNVIQSTALGANGEPLWKLDKGGAFTMNSATSGGFMRQTAEAIKVYDGNLVLRVQIGNLDV
Physico‐chemical
properties
protein length:1220 AA
molecular weight: 132270,44980 Da
isoelectric point:5,38074
aromaticity:0,07705
hydropathy:-0,29295

Domains

Domains [InterPro]
DC_0014
STR
1–1220
DC_0014
IPR053171
Unmapped
5–945
IPR053171 IPR015406
IPR055385
ATT
93–219
IPR055385 IPR032876 Coil
DBA08477.1
1 1220
Architecture
STR
ATT
STR
ATT
STR
STR 1-92 | ATT 93-219 | STR 220-343 | ATT 344-505 | STR 506-1220
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeS-D14H
[NCBI] 		2965063 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DBA08477.1 [NCBI]
Genbank nucleotide accession
BK061480.1 [NCBI]
CDS location
range 2317 -> 5979
strand -
CDS
ATGGGCGCAGTTCACCAGCACCTGGCCGGCCGCAAGGGCGGCAGTAGCAAGCCGAAACAGCCGGTCGAGGCACCCGACAGCCTGCGCTCGGTCGCGATGGCCAAGATTCTGCTCGCCGTGGGCGAAGGCGAGTTCGCCGGCGTTCCGAGCGAGCGCGATATCTACCTCGACAACACCCCGCTGATGGACCCGAGCGGTAACCTGAACTTCCCGAACGTTAAGTGGGAGTGGCGCGCGGGGTCGGTGGACCAGGACTATATCCCTGGCATTCCTGCGGTTGAGAACGAGACGTCTGTCAACGTCGAGTTGCGCAGCGATACGCCCTGGGTGCGCTCGCTGAGCAATATCCAGCTTTCCGCAGTGCGTCTGCGCTTCGCCTGGCCAGCGCTCCAGCAGCAGGACACCAACGGCAACATCGGCGGGTACCGGATCGAATATGCCGTAGATCTGGCCACCGACGGCGGCGCCTATCAGGAGGTGCTGCGCGAGGCCGTCGATGGCAAGACCACCACCCGCTACGAGCGTTCCCGCCGGATCGACCTGCCGGCGGCCACCAATGGCTGGCAGGTGCGCGTCCGCCGCCTGACGCCGAACCAGAACAACAACCGCATCGCCGACACCATGCTGATCGCCGGCTACACCGAGGTGATCGACGCGAAGCTGCGCTACCCGAACACGGCCCTGCTGTACGTCGAGTTCAGCGCAGAGCAGTTCAGCAACATTCCGGCTGTCACAGTCGACTGCCGCGGGCGGAAGGTCCAAGTGCCGAGCAATTACGATCCGGAGACCCGGGCCTACCTCGGCATCTGGGACGGCACGATGAAACAGGCCTGGACCGACAACCCGGTCTGGCACACCTACGACATCGTGACCAACGATCGCTTCGGTGTGGGTAAACGCATCAAGGCCTGGATGGTAGACCGTTGGGAGATGTACCGGATTTCCCAGTACTGCGACCAGTTGGTGCCGGATGGGAAGGGTGGCCAGGAGCCGCGACACACCTGCAACCTGAACCTGCAAAGCCGCGCCGGGGCCTGGGAGCTGCTGCGCGACCTCACCGCTATCTACCGTGGTATGGCGTACTGGGCCCAGGGCCAACTGAAGATCCAGGCGGATATCCCGCGCGCCACCGACGTCGATTTCGCCTACACCAGGGCCAATGTCATCGACGGCCGCTTCAGCTACGGCTCGGCCAGTGAGCGCACTCGCTACAGCCGTGCCTTGGTCAGCTACGACAATCCGGCGAACAACTACGACACCGACGTGGCTGTGGCCACCGATAAGCGCCTGCAGCGGCGTTACGGCGACAACCCGGTCGAGGTGGCAGCCATTGGCTGCACCCGCGAGAGTGAGGCCCAGCGGCGCGGAAAATGGGCGATCCTGACCAACAGCCAGGATCGCACGGTAACGTTCCGTACCGGGATGGATGGAGCGATACCGCTGCCGGGATGGGTGATTCCGGTGGCTGATGCGCTGTTGGCTGGACGGGAGATTGGGGGGCGGGTTTCTGCGGTTGCTGGCCGAGTGATCACCTTGGATCGCGATACCCAGGCAAAGGCTGGCGACCGGCTGCTCCTGAACCTGCCCAGCGGTAAGGCTGAGGCGCGAACCGTGCAGTCGGTAACCGGGCGCGCGGTGACCGTGACGACAGCCTACAGCGAGACCCCGCTACCGGAACTGGTCTGGACCCTCGATGCCGACGACCTGGCGGTGCCGCTCTACCGTGTGATGAAAGTCAGCCAGCCGGAGCGGGGTGTCTTCGAGATCACCGCTCTGCAGTACGAGCCCGGGAAGTTCTCAGCGATCGACACTGGTGCCAAGTTGGAGAGCCGGCCGATCAGCGTTATCCCGATCACCACCGTGGCGCCGCCGGCGAGCGTCACGCTGACCTCGCACTACCAGTTCGATCAGGGGTTGGCGGTCAGCACGATGACCATCGCCTGGCCTGCAGTAGAAGGGGCGGTGGCCTACGACGTGGAGTGGAAGAAGGACAGCGGCAACTGGATCCGCCTGCCGCGTACCGGCACCACCAGCGTCGATGTGACTGGCATCTACGCAGGTGGCTATCTGGCGCGGGTGCGCGCGGTGTCGGCCTTCGACATCACGTCGGTCTGGAAGAGTTCGATCCTGACCCAACTCAGCGGTAAGACCGGCGCGCCGCCGGCGCTGGCGTTCCTGCGTACCACCAGCGGACCGTGGAAGATCGGCCTGGAGTGGGGATTCCCGGCCAGTGGCGCGGCGGACACCGCCTACACCGAGATCCAACAGTCGGTTACCCCGGGCGGCAGCGAACAGAACGCAACTGCCCTGGGCTTGTTCGCGTACCCGACCGACACCCACACGCTGACCTCGCTGGCGGCCGGCGCTCGCCTGGCCTTCCGCGGGCGGCTGATCGACCGGACAGGCAACGTCGGCCCCTGGTCGGCCTGGGTCGACGGTATCAGCTCGACGGATGCGAGCGAGTACAACGAACTGATCACCAAGGAGTACGTCGAGTCCGCGCTGGGCGAGCAGTTCTTCGCCGACATCGATCAGATGCAGGTCGATATCAGTGGCCTGCAGGGCCAGATCGATAATCTGTCCGATGTGCTGGCCTACGACCCGACGAAGACCTACGCGAAGAACGATATCGTGCGGGTCGGCAACCGGCTGTATCAGGCAAAGCAGGCGGTGCCGCTCAACGCCTCGCCGCCGAACGCGTCCTACTGGGCCGACATCGGACAGTCGATCGAGACGGCCAACGGCCTGGCCCAGCAGGTGGCCACCAACACCGCGGATATCACCGAGCTCGACGGTAAGGTCGAAGCGGCGGCTTCGAGCCTGGATGTTCTGCAGGCTGCCGCCCGCCGGGAGCCGGCGACCGGAGAGAAGGCCGATGCGCTGAAGGGCTGGGACACCATTGCTCGAGCCGCCACCGAAGTCACCGTGCGGGCGAACGAGGACGAAGCGCAGGCGAAGCGGACGAGCTTGCTTGAAGCGCGGACTGTGACGGCGGAGGGCAGGATCGCAACCGTCGAGTCGGTCGTTGCGTCGAACAATGCCGTAACCGTCCAACGCCTGGATCAGCTATCCGGCCAGGTTGCGAGCAACGCCTCGGCCATCAGCACCGAACAGACCGTCCGCGCCAACGCGGACAGCGCCCTGGGGCAGCGGATGGATACCGTCAGTGCGCGCACCGATACCAACGAGGCGAACATCCAGACCACATCTCAAGCGGTTACCTCGCTGGATGGAAACGTCAAGGCGCTCTACAGCGTGAAGCTCCAGGCGCATGCCAATGGCCAGAAGTACGCCGCTGGCTGGCAACTGGGCTTCGACAGCGGTACGAGCGTGACGACCATGGCGTTCCAGGCTGATCGGTTCCTCTGGTTCAACAGTTCCAGCGGGCAGACCGTGGCGCCTGTCTCGATCGTCGGCGGCCAGATGTTCATCAACAACGCGATGATCCAGGAGGGCTCGATCACCAACGCGAAGATCGGCAACGTGATTCAGTCGACCGCCCTCGGTGCCAACGGCGAGCCGCTGTGGAAGTTGGATAAGGGCGGCGCGTTCACAATGAACAGCGCAACGTCGGGAGGGTTTATGCGTCAGACGGCAGAGGCAATAAAAGTGTATGACGGAAACTTGGTGCTTCGAGTCCAGATCGGGAATCTTGATGTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
e77dbd55f82eb02be13ad6c82f68871f210728b7bb256969ff997829421274ea
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7815
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophage identification and molecular analysis in the genomes of 53 Pseudomonas aeruginosa strains isolated from critical care patients Gonzalez de Aledo,M., Blasco,L., Lopez,M., Ortiz-Cartagena,C., Bleriot,I., Pacios,O., Hernandez-Garcia,M., Canton,R. and Tomas,M. 2023 — GenBank