Protein

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Genbank accession
AXH71338.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,83
TSP
Evidence RBPdetect2
Probability 0,91
Protein sequence
MTNARDKANIPVLNFQSKGIDDNADATAITIDSSERVGILQTSPNSNLHVSSGGNTKVRFDGNSNNNTSTFLISHVASGDVGLQFNSNQLNMFSYGDIAFYPSTSNISGSYPNNEVMRIRNNGKIGIGTSAPQAVTEIVGGTGDIRVLRLRTGDSTTANNSGIDFQVLSSATQGNRSSKITLDADGANSTGSDYFQFTKTGGSDQKIFFPSNDLIFEGSSEHLRITSAGKVAIGTSTAEGILKLDNTGQTSETLLTLEDTGGSGAHSQITLKNTTGIVASLLTTSDNLEFRVDDATVFSNISGSEHMRITSAGLVGVGTSSPSEELHVEGSGTTNAIVKSTGSGTAAAVGSVNNSGTAGKILMYGSGQGAYGSLGSGQMALYSDAAGMSIMNDNSSGAIKFSMHSGSEKMRIDSSGNVGIGTASPASIGSNITTVEITGGSTIRTGGLYLSNSDKSIKAYWYGSNTGFSFGTESNSDLKFVSNNTERVRITSGGTVFVSNTSEPNSGDNGAQISNGSYHVFCRNNSGSAVFRTFGSAGEFRTIGNGNAQNTNNSYGAISDRVLKENEVDASSQWNDIKALQIKHYNFKSKPNEKQLGVIAQDLEASGMNGLVENNQDELYTEDDVLPEGKNIGDVKLKNYKSVKYSILYMKSVKALQEAMERIETLEAKVTALETTTP
Physico‐chemical
properties
protein length:678 AA
molecular weight: 71164,18350 Da
isoelectric point:5,19238
aromaticity:0,06342
hydropathy:-0,37891

Domains

Domains [InterPro]
DC_1386
STR
1–238
DC_1386 DC_1042 DC_1367
IPR030392
CHP
559–670
IPR030392
IPR030392
CHP
559–605
IPR030392 Coil
AXH71338.1
1 678
Architecture
STR
STR
RBD
STR 1-238 | STR 243-385 | RBD 430-678
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXH71338.1
1 678
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0031
Central domain 11 209 200 0,0599
C-terminal 210 678 468 0,9328
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-678

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC120P
[NCBI] 		2283021 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidatus Pelagibacter sp. HTCC7211
[NCBI] 		439493 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXH71338.1 [NCBI]
Genbank nucleotide accession
MH598807.1 [NCBI]
CDS location
range 35554 -> 37590
strand +
CDS
ATGACTAACGCAAGAGATAAAGCAAACATACCAGTATTAAATTTTCAATCTAAAGGTATAGATGACAATGCTGATGCTACTGCTATTACAATAGATAGTTCTGAGAGAGTTGGTATTCTTCAAACATCTCCAAATTCAAATCTTCATGTATCAAGTGGTGGAAATACTAAAGTAAGATTTGATGGTAATTCAAATAATAATACTTCTACATTTTTAATAAGTCACGTAGCTTCTGGAGACGTAGGATTACAATTTAATAGCAATCAACTTAATATGTTTAGTTATGGCGATATAGCTTTTTATCCTAGTACTTCAAATATTTCTGGAAGTTATCCTAATAACGAAGTAATGAGAATTAGAAATAATGGAAAAATTGGTATCGGAACTTCAGCACCACAAGCTGTTACCGAAATAGTAGGTGGAACTGGAGATATTAGAGTTTTAAGATTAAGAACTGGCGACAGTACAACTGCAAATAATTCTGGTATTGATTTTCAGGTACTTTCAAGTGCTACTCAAGGAAACAGAAGTTCTAAAATTACTTTAGATGCTGATGGTGCAAATTCTACTGGTAGTGATTATTTTCAATTTACTAAAACTGGTGGTTCTGACCAAAAAATATTCTTTCCTAGTAATGATTTAATATTCGAAGGCTCAAGTGAGCATCTTCGTATCACATCAGCAGGAAAAGTAGCAATAGGAACATCTACAGCAGAAGGAATACTAAAATTAGATAATACAGGACAAACTTCAGAAACACTTTTAACTTTAGAAGATACTGGTGGTTCTGGTGCACATTCACAAATAACATTAAAAAATACTACTGGTATAGTAGCTTCACTTCTTACAACTTCAGATAATTTAGAATTTAGAGTTGATGATGCTACTGTCTTTTCAAATATTTCTGGTTCAGAACATATGCGTATCACATCAGCAGGATTGGTTGGTGTCGGAACTTCATCGCCTAGTGAAGAACTTCATGTAGAAGGAAGTGGAACAACAAATGCAATAGTTAAAAGTACAGGTTCAGGTACAGCAGCAGCAGTAGGTTCTGTTAATAACTCTGGTACTGCAGGTAAAATATTAATGTATGGTTCAGGTCAAGGTGCTTATGGTTCTCTTGGTTCTGGACAAATGGCTTTATATTCTGATGCTGCAGGAATGAGTATTATGAATGATAATTCAAGTGGTGCTATTAAATTTTCAATGCATTCTGGTTCAGAAAAAATGCGTATCGATAGTTCTGGTAATGTTGGTATTGGTACAGCTTCTCCTGCTAGTATTGGAAGCAATATTACTACAGTAGAAATTACTGGTGGAAGCACAATTAGAACTGGTGGTCTATATCTTTCAAACTCAGATAAAAGTATCAAGGCTTACTGGTATGGAAGTAATACTGGTTTTTCTTTTGGAACAGAATCAAATTCAGATTTAAAATTTGTTTCTAACAATACTGAGAGAGTTCGTATCACTAGTGGTGGAACTGTATTTGTATCTAATACATCAGAGCCAAATTCAGGAGATAATGGAGCGCAAATATCTAATGGAAGTTATCATGTATTTTGTCGTAATAATTCTGGTTCAGCAGTATTTAGAACTTTTGGTTCAGCAGGAGAATTTAGAACAATAGGTAATGGTAATGCACAAAACACAAATAATAGTTATGGTGCAATATCTGATAGAGTTTTAAAAGAAAATGAAGTTGATGCTAGTTCTCAATGGAATGATATTAAAGCATTACAAATTAAACATTATAATTTTAAATCAAAACCTAATGAAAAACAATTAGGAGTTATAGCACAAGACCTTGAAGCATCAGGAATGAATGGTCTTGTAGAAAATAATCAAGATGAACTTTATACTGAAGATGATGTTTTACCAGAAGGTAAAAATATTGGAGATGTAAAATTAAAAAATTACAAATCAGTTAAGTATTCAATTTTATACATGAAGTCAGTTAAGGCTTTGCAAGAAGCTATGGAAAGAATTGAAACTTTAGAAGCTAAAGTAACAGCACTAGAAACAACAACACCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4ed1095a59fe1ddcd7873cf29d7a419053c439c6c72af8e28a7a647b237e786b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6303
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50