Protein

View in Explore
Genbank accession
WBF04728.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSTLQATAQQTPLQQLQELVDSGNKLIMLQNGSPVEFPLSLLTQVMGDAVTLEKLSAVDSTAMFGSVQSFADLRKLKPTANNVRVNLRGWNNGSDLGGGQFIGRIGVAKASMKKDDGGVIATSGTDWYWERAIGDINTLDVTHFGAVADGVTDSLPAVLAMFKWSQASGGFQAIQFPAGKFFLSQFEYLTEIARFRLNGTATNHFGYFNATTLTSDSNENVLFSLNARWVEISGFVFEGRTDIDGNKKGFYKNIIAGGQYTRISMMRWSKVGGTCVDMLDTLDSKIDQWYASGCTGDVIKGYWSGRAAGVWDHMTAVELSNFNVQNCRGGKVLNLPRCTQSFIWNGWIEHSDNPGDLSNGQWIINGLNIEDCKMSPLKLTFARIINFQLGLQSGSSVSYDVQDGDVEWLSQWERGHVDIDNHGIYIDGTIDAAIVGSRNKLSNSSDKAKWFCLGRFFTPSEGDQIDINMVGTGNFLSISTTMADIDDTRQGGGNTLIRYQAKKGAAGLSLMPMGSSPIKAVAYTSTSAGNITLYVQLKPYTRNVIPIITATGLTHFEAGVSVYWRPDRKALTDEEMAAIADVKPVVEQWSIGQLAGIGATQEGYLLVKSKVENGHLAVKVGNKIQYIQLKASPQ
Physico‐chemical
properties
protein length:634 AA
molecular weight: 69100,30940 Da
isoelectric point:5,84409
aromaticity:0,09464
hydropathy:-0,16057

Domains

Domains [InterPro]
DC_0813
ATT
1–65
DC_0813 IPR059934 IPR011050
IPR012334
STR
138–503
IPR012334
DC_0716
STR
168–634
DC_0716
WBF04728.1
1 634
Architecture
ATT
RBD
STR
ATT 1-65 | RBD 66-132 | STR 137-634
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WBF04728.1
1 634
Domain Start End Length (AA) Confidence
N-terminal 1 155 155 0,9905
Central domain 156 429 275 0,9858
C-terminal 430 634 204 0,9781
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-155
Central
156-429
C-terminal
430-634

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage vB_Ea277G
[NCBI] 		3016906 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WBF04728.1 [NCBI]
Genbank nucleotide accession
OP991903 [NCBI]
CDS location
range 41163 -> 43067
strand -
CDS
ATGAGTACCTTACAAGCCACTGCGCAGCAAACCCCACTTCAACAGCTCCAGGAATTAGTAGACTCCGGGAACAAATTGATAATGCTGCAAAATGGTTCACCAGTTGAATTCCCCCTGAGCCTTTTGACCCAGGTAATGGGGGATGCGGTGACACTGGAGAAGTTGTCAGCGGTCGACAGCACTGCCATGTTTGGGAGTGTGCAGTCCTTTGCTGATTTACGTAAACTCAAGCCGACAGCAAACAATGTCCGGGTTAACCTGCGTGGTTGGAACAACGGTTCCGACCTCGGCGGCGGTCAGTTCATTGGGCGTATCGGTGTGGCGAAAGCGAGCATGAAGAAAGACGATGGCGGTGTGATTGCCACGTCTGGCACCGACTGGTATTGGGAGCGTGCTATCGGGGACATCAACACGCTGGACGTGACGCACTTCGGTGCGGTAGCTGACGGCGTGACAGACAGCCTCCCGGCGGTACTGGCGATGTTTAAGTGGTCACAGGCGAGTGGTGGGTTCCAGGCGATTCAATTCCCGGCAGGGAAGTTCTTCCTGTCGCAGTTTGAATACCTGACTGAGATTGCCCGCTTCCGTCTGAACGGCACAGCAACCAATCACTTCGGTTACTTCAATGCAACTACCCTGACGTCGGACTCGAACGAGAACGTCCTGTTCAGTCTGAACGCACGTTGGGTCGAGATTTCCGGATTTGTCTTTGAAGGTCGCACGGACATTGACGGGAACAAGAAGGGGTTCTACAAAAACATCATTGCCGGGGGACAGTACACCCGTATCAGCATGATGCGTTGGTCCAAGGTGGGCGGGACTTGCGTGGATATGCTGGATACCCTTGACTCGAAGATTGACCAGTGGTACGCCAGTGGTTGTACCGGCGATGTCATCAAAGGGTATTGGTCGGGGCGTGCCGCGGGCGTATGGGACCACATGACGGCGGTGGAGCTGAGTAACTTTAACGTCCAGAACTGTCGGGGCGGAAAGGTACTGAACTTGCCGCGTTGCACGCAATCCTTCATCTGGAACGGTTGGATTGAGCACAGTGACAACCCAGGCGACCTGTCGAACGGCCAGTGGATTATCAACGGACTGAACATCGAAGACTGTAAAATGTCTCCGCTGAAACTGACCTTTGCACGCATCATCAATTTCCAGCTGGGTCTGCAATCCGGTTCGAGCGTCTCTTACGACGTACAGGACGGGGACGTAGAATGGCTGAGTCAGTGGGAGCGTGGGCATGTCGACATTGACAACCACGGTATCTACATTGACGGGACGATTGACGCTGCGATTGTGGGGTCGCGCAACAAACTCAGTAACTCTTCTGACAAAGCGAAATGGTTCTGTCTGGGACGGTTCTTCACGCCTTCTGAAGGGGACCAAATCGACATCAACATGGTGGGGACGGGGAACTTCCTGTCCATCTCTACCACCATGGCAGATATCGACGACACCCGACAGGGCGGAGGTAACACCCTGATTCGCTACCAGGCGAAGAAAGGGGCGGCAGGGTTGTCGTTAATGCCGATGGGCTCAAGTCCAATCAAGGCGGTAGCGTACACCTCAACCAGCGCAGGGAACATCACGCTTTACGTGCAGCTGAAGCCGTACACCCGTAACGTGATTCCTATCATCACGGCGACCGGGTTAACGCACTTCGAAGCCGGGGTGAGTGTATACTGGCGTCCAGACCGTAAAGCCCTGACCGATGAGGAGATGGCGGCAATTGCCGACGTTAAGCCTGTGGTCGAGCAGTGGTCGATTGGTCAGCTCGCGGGTATCGGTGCCACGCAGGAGGGATACCTGTTAGTGAAGTCTAAAGTGGAGAACGGACATCTTGCGGTCAAGGTCGGCAACAAGATTCAGTACATCCAACTGAAGGCGTCACCGCAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4035a504b8e621ee80b9209fb6010d74ab7f3f430d27701d287b74f8bcdd43c6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6531
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequences of Erwinia Amylovora phage vB_Ea277G Renteria-Soto,D.L., Romo-Chacon,A., Rios-Velasco,C., Olivas,G.I. and Berlanga-Reyes,D.I. 2023-07-17 — GenBank