Protein

View in Explore
Genbank accession
YP_009200585.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MANKISTVRTYPLNGAVNFTITFEYLARKFVQVTLIGKDRKELVLNQDYRFTTKTQITTSRSWTAADGYQMIEIRRFTSATDRLVDFADGSILRAYDLNISQIQTLHVAEEARDLTADTIGVNNDGHLDARGRKIVNLAFATGDYDAVPLKQVKERESSAWNAVTKADEHANRSNKEANRSRDEADRAKREADRSTQQAGVSTQQAVESKKQADRSNSEANRAKGYADSMTASVAEAKKQADRSNSEANRARDEANRAAGEVTKAAAEVAKAAAHVETAKGHADRANTEANRSKSEADRAKTEADKLGSMNALAEAIDRVEDSDVYFKGKVGSSVLTLHNDARGDDTQPVDLVWNQWRGQGAKDTVWEQWIQAGTKRMDFYVFGNTDPSTWPDGRSNGHGRHDFYGGFHAHHDSRFYQNVSMDGYLRVSKYIRADERFYTESTFGSGGFASQLNNNAPYSQSLPGNQDGNVYYPMIKQYGRRSNGYPAAFSIGMVSKGSNNFHEGIIQLKGDGGHDHTLTMTIDGLLSSNKGWYIPPDGNLYIKKYGSYIDAWVNKRLGEHAYNKSETNNLVNGRLTQAQGDGRYVRKNAGWAEVWKGSAGGGVSVGLSQDVRWRTIWIQTNGRWNPVQIGDNGAYYISSMGGWLTFTISNNGRTFRNDQDNRSVPTRILVQNQ
Physico‐chemical
properties
protein length:674 AA
molecular weight: 74917,46510 Da
isoelectric point:9,01250
aromaticity:0,09199
hydropathy:-0,79258

Domains

Domains [InterPro]
IPR005604
ATT
1–130
IPR005604 Coil Coil Coil G3DSA:2.60.320.30
DC_0778
STR
1–673
DC_0778
YP_009200585.1
1 674
Architecture
ATT
STR
ATT 1-130 | STR 131-673 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage P483
[NCBI] 		1572753 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Berlinvirus
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009200585.1 [NCBI]
Genbank nucleotide accession
NC_028822.1 [NCBI]
CDS location
range 880 -> 2904
strand -
CDS
ATGGCTAACAAAATTTCCACTGTACGTACTTACCCGCTGAACGGTGCCGTGAACTTCACGATTACCTTTGAGTATTTAGCACGTAAGTTCGTCCAAGTGACACTCATCGGGAAAGACCGTAAAGAGTTGGTTCTTAATCAGGACTATCGCTTTACCACTAAGACCCAAATCACAACCTCCCGTTCGTGGACTGCTGCCGATGGTTATCAGATGATTGAGATTCGTAGATTCACTTCTGCAACCGACCGTCTGGTTGACTTTGCTGATGGCTCAATCCTTCGTGCGTATGACCTTAACATCTCACAGATTCAGACGCTGCACGTAGCTGAAGAGGCACGAGACCTAACTGCGGATACCATTGGTGTCAACAATGATGGTCACTTGGATGCCCGTGGTCGTAAGATTGTGAACCTAGCGTTCGCTACTGGTGACTATGATGCTGTCCCACTGAAGCAAGTAAAAGAGCGCGAGTCGTCTGCTTGGAACGCTGTGACCAAAGCTGATGAACATGCTAACCGTTCTAACAAGGAAGCTAACCGCTCACGTGATGAAGCTGACCGTGCTAAACGTGAAGCTGACCGCTCAACGCAACAGGCAGGTGTCTCAACGCAACAAGCAGTTGAGTCCAAGAAGCAAGCTGACCGTTCCAACTCTGAGGCCAACCGAGCTAAAGGTTATGCTGATAGTATGACCGCAAGTGTCGCTGAGGCCAAGAAGCAAGCTGACCGTTCCAACTCTGAGGCCAATCGTGCCCGTGATGAGGCCAATCGTGCTGCCGGAGAAGTGACTAAAGCTGCTGCTGAGGTTGCCAAGGCTGCTGCACATGTTGAGACCGCTAAAGGACATGCAGACCGTGCTAACACTGAGGCTAACCGCTCTAAGAGTGAAGCTGACCGTGCTAAGACTGAGGCCGACAAGTTAGGCAGCATGAATGCACTTGCAGAGGCCATTGACAGGGTTGAGGATAGTGATGTTTACTTTAAAGGCAAGGTAGGCTCTAGTGTTTTAACGCTCCACAATGATGCTAGAGGCGATGACACACAACCAGTTGATTTAGTATGGAATCAGTGGCGTGGACAGGGCGCTAAGGATACCGTATGGGAACAGTGGATTCAGGCTGGTACAAAACGCATGGACTTCTATGTGTTTGGAAATACAGACCCTTCTACGTGGCCTGATGGTCGCTCCAATGGGCACGGTCGTCATGACTTCTATGGGGGATTCCACGCTCACCATGACTCTCGATTCTACCAGAACGTCTCTATGGATGGGTATCTTCGAGTCTCTAAGTATATTAGGGCTGACGAGAGATTCTACACTGAGTCAACTTTTGGGTCAGGAGGGTTTGCAAGCCAGTTGAATAACAATGCCCCTTACTCGCAAAGCCTCCCCGGAAATCAGGATGGCAACGTGTATTACCCTATGATTAAACAATATGGTAGACGCTCTAATGGTTATCCGGCGGCATTCTCTATTGGCATGGTATCGAAAGGTAGCAACAACTTTCATGAGGGTATCATCCAACTTAAGGGAGACGGGGGTCATGACCACACACTGACCATGACGATTGATGGACTGCTATCTAGTAATAAGGGGTGGTATATCCCGCCTGATGGTAACTTATACATCAAGAAGTATGGGTCTTATATCGACGCTTGGGTAAACAAACGCCTTGGCGAACATGCCTACAACAAGAGCGAGACGAACAACCTAGTGAATGGTCGATTGACACAAGCCCAAGGCGATGGTCGCTATGTCCGCAAGAACGCTGGGTGGGCTGAGGTCTGGAAAGGCTCTGCTGGTGGCGGTGTTTCCGTAGGTCTCTCACAGGATGTCCGATGGAGAACCATCTGGATTCAAACCAACGGTCGCTGGAACCCTGTTCAGATTGGGGATAATGGGGCTTACTATATCTCGTCTATGGGCGGCTGGTTGACCTTTACAATCTCTAACAACGGGCGAACTTTCCGTAACGACCAAGACAACCGTTCAGTCCCTACGCGAATCTTAGTTCAAAACCAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c6fcd97922f170ae5a32d4c2ea6da8fdb8a2aa87f3eca0ca8ebf5ff6b0572708
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6499
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and genome sequencing of a novel bacteriophage infecting APEC Chen,M. and Zhang,W. 2022-07-14 — GenBank