Protein

View in Explore
Genbank accession
APZ81887.1 [GenBank]
Protein name
tail fiber protein and host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,62
Protein sequence
MLLTIHDANLQKVAFIDNDKQSTLNYYDDTWTRNLETGSSTFEFTVFKKAIKSDTASHKTYNHLNEKAFVSFKHRGKSYVFSVMTVEENEQTIKCYCENLNLELINEYANPYKAAKAMSFVEYCNAMDLLNFTHLSVGINEISDQKRTLEWEGQDTKLARLLSLATKFDAEIDFDTELNSDSSIKSFKVNVYHEYDDKHQGVGRVRNDIQLTYGKNLKSIKRTVDKTGIYNAVRPTGKGKTKGTDGNEVETIVTIGSLGVWSENNADGVREFYQSGEMLYAPLSMQMYPSTFTSGTQSDQWIRKDIEVESDNPTVIRAAGIRDLKKNAYPALTYDVDGFLDVEIGDTVRIYDDGFTPILLIKARVSDQKISFTNPKSNRTTFANFKALKNNLSSGIQSAFERLFEAAKPYTIKLATDNGVIFKNQIGQSLVTPTLYKGGKPIVAGVTWRWSLNEEEVTTGMTYIVKGSSVIDTVTLTVAAYVGNDEVAVDEISFVNVVDGKHGNGIANVTNYYLATVASTGITENSSGWTTTPQSMTEEKRYLWNYRVELYTNGTSKTTAPVIIGVHGSKGDKGGFSEEQLDEVNKKIDSKADQVLTQEQLNALNEKAQLLDAEMKAKASMEAFSELEKAYNAFVENNAKDTAKSEKDLIEAGRRIELLTTQFGGLAELKTFIDTYMKSTNEGLIIGNNDASSTIKVSSDRISMFSAGREVMYISQGVIHIDNGIFTASVQIGKFRTEQYHLNADMNVIRYVG
Physico‐chemical
properties
protein length:753 AA
molecular weight: 83990,23560 Da
isoelectric point:5,39751
aromaticity:0,09429
hydropathy:-0,41262

Domains

Domains [InterPro]
DC_0002
STR
1–753
DC_0002
IPR007119
Unmapped
59–251
IPR007119
IPR010572
ENZ
144–386
IPR010572
APZ81887.1
1 753
Architecture
STR
STR 1-753
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Str01
[NCBI] 		1933695 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
APZ81887.1 [NCBI]
Genbank nucleotide accession
KY349816.1 [NCBI]
CDS location
range 14513 -> 16774
strand +
CDS
ATGCTTTTAACAATTCATGATGCAAACTTACAAAAGGTAGCATTTATTGATAATGATAAACAAAGCACGTTGAATTATTATGATGACACTTGGACTAGAAACTTAGAAACAGGGTCATCTACCTTTGAATTTACGGTATTTAAAAAAGCAATTAAGTCTGATACAGCATCACACAAAACATATAACCATTTGAATGAGAAAGCCTTTGTTTCTTTCAAGCACCGTGGTAAAAGTTATGTCTTTAGCGTGATGACAGTTGAAGAAAATGAGCAAACTATTAAATGCTATTGTGAAAATCTAAATCTTGAGCTTATCAATGAATATGCAAACCCATATAAGGCAGCTAAAGCCATGTCTTTTGTGGAGTATTGTAATGCTATGGACTTGTTAAACTTTACCCATTTATCCGTTGGTATCAATGAAATTTCAGACCAAAAACGAACGCTTGAATGGGAGGGACAAGATACTAAACTCGCCCGTCTATTGAGCCTAGCTACCAAGTTTGATGCAGAGATTGATTTTGATACAGAATTAAATTCAGATAGTTCTATTAAATCATTTAAAGTCAACGTTTATCATGAATATGATGATAAGCATCAAGGTGTTGGGCGTGTTAGAAACGATATTCAACTAACATACGGAAAAAATTTAAAATCAATTAAACGCACAGTTGATAAGACTGGTATTTATAACGCTGTACGACCAACAGGAAAAGGAAAAACAAAGGGTACAGATGGAAATGAAGTCGAGACTATTGTAACTATTGGTAGCTTGGGCGTATGGTCTGAAAATAACGCTGATGGGGTACGTGAGTTTTACCAAAGTGGAGAGATGTTATATGCTCCGTTATCAATGCAAATGTACCCATCAACTTTTACATCTGGTACACAAAGTGACCAGTGGATAAGAAAGGATATAGAGGTTGAGAGTGATAATCCAACTGTTATCCGAGCTGCTGGTATTCGTGACCTTAAAAAAAACGCTTACCCAGCTCTAACTTATGATGTCGATGGTTTCCTTGATGTGGAAATTGGGGATACTGTAAGAATTTATGATGATGGTTTTACACCTATTCTATTGATTAAAGCTAGGGTATCAGACCAGAAAATAAGTTTTACTAATCCCAAGAGTAATAGAACAACTTTTGCTAATTTCAAAGCACTTAAAAACAATCTATCTAGTGGTATTCAATCAGCCTTTGAGCGACTTTTTGAGGCTGCTAAACCTTATACTATTAAACTTGCAACAGACAATGGCGTTATTTTTAAGAACCAAATAGGACAAAGCCTTGTTACTCCAACTCTTTATAAAGGTGGTAAACCAATAGTAGCTGGTGTTACATGGCGTTGGTCATTGAATGAAGAAGAAGTAACAACAGGCATGACTTACATTGTTAAAGGCTCAAGTGTAATTGATACAGTAACTTTGACAGTAGCAGCTTATGTTGGCAATGATGAGGTTGCTGTTGATGAGATTTCATTTGTCAATGTTGTTGATGGCAAACACGGTAATGGTATCGCTAATGTCACTAACTACTATCTAGCTACAGTAGCATCAACTGGTATTACTGAAAATAGTTCAGGTTGGACAACTACCCCACAATCCATGACAGAGGAAAAACGCTACTTATGGAATTATAGGGTTGAACTTTACACCAATGGTACAAGTAAAACTACCGCCCCAGTTATTATTGGTGTACATGGGTCAAAGGGGGACAAGGGAGGTTTTTCAGAAGAACAATTAGATGAAGTTAATAAAAAAATTGATAGTAAAGCTGACCAAGTCCTAACGCAAGAGCAACTAAATGCTCTAAATGAAAAAGCACAGCTCCTAGATGCTGAGATGAAAGCAAAAGCATCAATGGAGGCGTTTAGTGAATTGGAAAAAGCCTATAACGCTTTTGTTGAAAATAATGCTAAAGATACAGCGAAATCTGAAAAAGATTTGATTGAAGCCGGAAGAAGGATTGAGTTGCTAACAACACAATTTGGAGGATTGGCAGAGCTAAAAACATTCATTGATACCTATATGAAAAGCACCAATGAGGGATTGATTATCGGTAATAATGATGCTAGCTCAACTATCAAGGTATCGAGTGATAGAATTTCCATGTTTTCTGCTGGTCGTGAGGTTATGTATATCAGTCAAGGAGTTATCCATATTGATAATGGTATCTTTACCGCATCAGTACAGATTGGAAAATTTAGAACAGAACAGTATCACTTAAACGCTGATATGAACGTAATTAGATATGTTGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f716947acd0ee461b3a07e8ee5d58a0a983d36a65e9ff4ed3031e98eeb0ab892
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8138
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The genomic perspective on the phages infecting Streptococaccae Harhala,M., Barylski,J., Huminska,K., Dorota,L., Wojciechowicz,J., Wojtyna,K., Kus,M., Hodyra-Stefaniak,K., Kropinski,A. and Dabrowska,K. 2020-06-01 — GenBank