Protein

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Genbank accession
WGL30651.1 [GenBank]
Protein name
spike glycoprotein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MILSSADILRILSGDAIIREEAELKIVEGRPGLGVGDRVYIYIDKYPTVDEFEATWNIWVQDNSGMGRYVLDAMTVLLPGFDFNGKHYTTTDFASERTVIKTQEEIDREEFKAERVKFESRFSGIQKGVEDRLSAVRDGIDGRDGIDGKDGLPGRDGRDGVDGKDLTATEVTLEELANVEQGIPKEKGQVLTWDGTDWTNLFVPQIASVSGGGSETTETGSGGPLSTGVWKYRDNQATPPGDKKSHLTMLIIR
Physico‐chemical
properties
protein length:253 AA
molecular weight: 27847,70570 Da
isoelectric point:4,64621
aromaticity:0,07510
hydropathy:-0,48893

Domains

Domains [InterPro]
DC_1499
STR
151–246
DC_1499
WGL30651.1
1 253
Architecture
STR
STR 151-246 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CRES2
[NCBI] 		3038221 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WGL30651.1 [NCBI]
Genbank nucleotide accession
OQ587940 [NCBI]
CDS location
range 65219 -> 65980
strand +
CDS
ATGATCCTTTCTAGCGCAGACATCTTAAGGATCCTCTCGGGCGATGCGATTATTCGCGAGGAGGCAGAGCTTAAAATCGTAGAAGGGCGTCCAGGGCTTGGCGTCGGAGACCGCGTTTACATCTATATCGACAAGTATCCAACAGTAGATGAGTTTGAGGCTACGTGGAATATATGGGTCCAAGATAACAGTGGTATGGGCCGTTATGTGCTTGATGCCATGACAGTACTATTGCCTGGCTTTGATTTTAATGGCAAGCATTATACCACAACAGACTTTGCATCTGAGCGCACAGTAATCAAAACCCAAGAAGAAATCGACAGGGAAGAGTTCAAGGCGGAAAGGGTTAAGTTCGAGAGCCGCTTCAGCGGTATCCAGAAGGGCGTCGAAGACCGCCTGAGTGCCGTGCGCGATGGAATAGACGGAAGAGATGGAATAGACGGCAAGGACGGCCTTCCTGGAAGGGACGGCAGGGATGGCGTAGATGGTAAGGACCTTACAGCCACTGAGGTAACCCTTGAGGAGCTAGCGAACGTAGAACAGGGGATACCAAAGGAAAAAGGGCAAGTCCTTACCTGGGACGGTACCGATTGGACAAACCTTTTCGTACCTCAAATTGCTTCCGTTAGTGGTGGAGGTAGCGAAACGACGGAAACAGGGTCCGGGGGTCCGCTAAGCACTGGCGTTTGGAAATATCGCGACAATCAGGCGACCCCTCCCGGCGATAAAAAATCACATTTAACAATGCTGATTATTCGTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
bffad822a3d75a312e32b61a86c89c123ccd5279c4268812171dce4ad98060d5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4557
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50