Protein

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Genbank accession
XCZ89573.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MLNDFNQPRGSTLGLYTPSLTLKKRLESLPNILDFDSDSQNDDSSRFRKAIAAGVKSLYVPEPQFFGSNKPLKIANVDIGTNIHIYGNGSAGYRQVGGAITILEGASYGFKLAGVDSQTRNIGGRIDGLSFQGEFPTTVADAIRCQSASSFALVNLSFRNLSGSALDLRDFMESHIEHCYFNSVGSDTKNPINIGDFVGSAPWNVNNLHIENNTFGSCSGNIINISDSANADLIWILNNKFEWDSTPASPNVSNKAVVYIGRAERVNVSGNGFVYYYPAHNKYDALIRVSDKSAYGNLFSDNTAWGCTPPSGSDLTPAFYWDIAGGSSAGSNNKANTNLPTRCTSIHSQDIDEPLVRTTPGNRPNLQSIGAMSPGYLSAHSLGGANASNFFVPDTGATKYGTVLEAQTGGEVRRLYIPKDIVSQRACVRVQARVMPSPTADALVGLICDGSIVSTTIQGATQDYHTVAAGGGWQIVEWLIPASSYTAGQLIFTNRSDTVKFKLDGVRVSRADFVDVTIAWSPTPISAGSVVNTTASITRVSSHVVGTSGLKTDGTLGGAVSSSYFNRGANTLVVQLAALTAATPSITQVTVRLFLN
Physico‐chemical
properties
protein length:596 AA
molecular weight: 63457,05210 Da
isoelectric point:6,51053
aromaticity:0,08725
hydropathy:-0,12752

Domains

Domains [InterPro]
DC_1550
ATT
1–34
DC_1550 IPR011050
IPR011050
STR
38–315
IPR011050
DC_0629
STR
275–596
DC_0629
XCZ89573.1
1 596
Architecture
ATT
STR
ATT 1-34 | STR 38-596
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCZ89573.1
1 596
Domain Start End Length (AA) Confidence
N-terminal 1 43 43 0,9602
Central domain 44 361 319 0,9886
C-terminal 362 596 234 0,9928
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-43
Central
44-361
C-terminal
362-596

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage pK3-24
[NCBI] 		3235047 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCZ89573.1 [NCBI]
Genbank nucleotide accession
PP915726.1 [NCBI]
CDS location
range 12649 -> 14439
strand +
CDS
ATGCTGAACGATTTTAACCAACCACGAGGCTCGACTTTGGGCCTCTACACCCCTAGCCTAACCCTGAAGAAACGCTTGGAGTCTCTCCCGAACATTCTGGACTTCGACTCCGACAGTCAGAACGATGACAGCTCCCGCTTCCGTAAGGCCATTGCGGCTGGTGTGAAATCCCTGTACGTACCGGAGCCACAGTTCTTTGGTAGCAATAAGCCACTGAAGATTGCTAACGTTGACATTGGGACCAACATCCATATCTACGGGAACGGCTCAGCTGGGTACCGTCAGGTTGGCGGGGCCATCACCATCTTGGAAGGGGCCAGCTACGGATTTAAACTGGCTGGTGTCGACTCTCAGACGCGAAACATTGGGGGCCGCATTGACGGCCTCTCGTTCCAAGGTGAGTTCCCAACGACCGTGGCCGATGCCATCCGGTGCCAATCTGCCAGTAGCTTCGCGTTGGTCAACCTCTCGTTCAGGAACCTCTCCGGGTCCGCTCTGGACCTGCGTGACTTCATGGAGAGCCACATTGAGCACTGCTACTTTAACTCAGTAGGTTCCGACACAAAGAACCCAATAAACATCGGGGACTTCGTCGGGTCAGCCCCTTGGAACGTCAACAACCTGCACATTGAGAACAACACCTTCGGGTCATGTAGTGGGAACATTATCAACATTAGTGACTCAGCTAACGCCGACCTCATTTGGATTCTCAACAATAAATTCGAATGGGACTCGACCCCGGCAAGCCCAAACGTTTCCAACAAGGCGGTGGTATACATCGGGCGAGCCGAGCGTGTCAACGTGTCCGGTAATGGCTTCGTGTACTACTACCCGGCCCACAACAAGTATGATGCCCTTATCCGAGTTTCCGATAAGTCGGCTTACGGTAACTTGTTCTCAGATAACACCGCTTGGGGCTGTACGCCACCTTCTGGCAGTGACCTTACGCCAGCGTTCTATTGGGACATTGCTGGTGGGTCATCGGCGGGGTCTAACAACAAGGCGAATACAAACCTCCCTACGCGCTGCACCAGTATCCACTCTCAGGATATCGACGAGCCGCTGGTGAGGACTACTCCGGGTAACAGACCAAACCTCCAGAGCATCGGGGCAATGTCTCCCGGATACCTCTCTGCGCACTCTTTGGGTGGAGCCAACGCTTCCAACTTCTTTGTGCCAGACACTGGGGCCACCAAGTATGGAACGGTTCTAGAGGCCCAAACTGGTGGTGAGGTTCGCCGCTTGTATATCCCTAAGGACATTGTTAGCCAGCGTGCTTGCGTTCGAGTTCAGGCCAGAGTGATGCCGTCTCCGACAGCTGACGCTCTTGTGGGGCTGATCTGTGACGGCTCCATTGTTTCCACCACAATCCAAGGCGCAACCCAAGACTACCATACGGTGGCGGCTGGTGGCGGCTGGCAGATTGTTGAGTGGCTCATCCCGGCGTCTAGTTACACTGCGGGCCAGTTAATCTTCACTAACCGTAGCGACACCGTTAAGTTCAAACTTGATGGAGTCCGTGTGTCACGTGCAGACTTCGTAGATGTGACGATTGCATGGAGTCCGACCCCAATCTCCGCAGGGTCTGTGGTAAACACCACTGCGTCAATCACTCGCGTAAGTTCCCACGTGGTCGGCACTAGTGGTCTGAAGACAGATGGTACATTAGGTGGAGCTGTTAGTAGCTCTTATTTCAACCGTGGGGCCAATACCTTAGTGGTACAGCTGGCAGCACTCACAGCAGCCACTCCGTCAATCACGCAGGTTACGGTCAGGCTGTTCCTTAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e1b174c98616c526f1520651e97572b3cc78cb12ebb4d0e3145d459a35fb47c6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7399
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of novel phage pK3-24 targeting multidrug-resistant Klebsiella pneumoniae and its therapeutic efficacy in Galleria mellonella larvae Cui,X. and Yuan,J. — — GenBank