Protein

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Genbank accession
WRQ08222.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAIIVLALDTSKPVGQQLSPELIAEIQLVAPSAVSNGSITTAKLRDLAVTAAKLALGAVHSEHIGTGEVKTVNLSDGTVTTEKVADNAITAVKVGIGVVTAVDEDDEPIEKKFKYLTATEFAAIESPDPNVTYMIRPDA
Physico‐chemical
properties
protein length:139 AA
molecular weight: 14483,35970 Da
isoelectric point:4,61285
aromaticity:0,02878
hydropathy:0,19712

Domains

Domains [InterPro]
DC_1383
STR
3–136
DC_1383
IPR056923
RBD
112–136
IPR056923
WRQ08222.1
1 139
Architecture
STR
STR 3-136 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Mycobacterium phage harman
[NCBI] 		3079577 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Mycolicibacterium smegmatis
[NCBI] 		1772 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Mycobacteriales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WRQ08222.1 [NCBI]
Genbank nucleotide accession
OR464702.1 [NCBI]
CDS location
range 11818 -> 12237
strand -
CDS
GTGGCCATCATCGTTCTCGCTCTGGACACGTCCAAGCCGGTCGGTCAGCAACTGTCGCCAGAGCTGATCGCGGAGATCCAGCTGGTGGCGCCGTCGGCGGTGTCGAACGGGTCCATCACGACGGCGAAGCTGCGCGACCTGGCTGTCACCGCGGCGAAGCTCGCGCTCGGCGCTGTGCACAGCGAGCACATCGGCACCGGCGAGGTGAAGACCGTCAACCTGAGCGACGGGACGGTGACGACCGAGAAGGTCGCCGACAACGCGATCACGGCGGTGAAGGTCGGCATCGGTGTGGTTACGGCGGTGGACGAGGACGACGAGCCGATCGAGAAGAAGTTCAAGTACCTGACGGCGACGGAGTTCGCGGCGATCGAGTCACCGGACCCGAACGTGACGTACATGATCAGGCCTGATGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
65046d425c46f54020d12c49626b2230b498d3af84aaf2cb6081b07fc2422e54
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7780
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Effective Isolation and Characterization of Mycobacteriophages with the Ability to Lyse Mycobacterium avium subsp. paratuberculosis Harman-McKenna,V.K. and De Buck,J. 2023 38257721 GenBank