Protein

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Genbank accession
WMM95025.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,63
TF
Evidence RBPdetect2
Probability 0,83
Protein sequence
MKVYGSSGWQNAGSSVNGTSQRYNYTATSGQTTFTGADNNGNTLTYDAGYIDVYLNGVKLLNGTDVTVTSGSSVVLASGATTGDVVDIVAYGTFSVASLNADNLDSGTVPDARITGAYTGITNLTMSGDLTVDTNTLKVDSTNNRVGIGTSSPSANLHLREITSNTTTASDQVKIQAESSGTTGVGFGTNILFLGERNGGTLQGMGRIGYVASTNTSSNLSSDFVVQTASAGTPTERMRIDSSGNFMVGTTDNTIYDNTSGGGLCYRPSLSLDIAREATSSGNYMLSLNNTGVDAKFINFGKDGTGVGSIGTKDTDLTIGNGGAGFLFLSSENKIRPFNVSTNSATDNVLTLGRSNTRFADLYLGGGLYVGGTGTANKLEDYEEGTYTPTYSASGGGSANYAGRTGNYVKVGKIVHIQIRLMTTTESFSGDITVTGLPFTSDSTSWHQTALSINGARLGTDMPNLNAYIVNNVSEITLEKGATNAYSASPVTDADLVNNTNYNILRIAGSYEIS
Physico‐chemical
properties
protein length:514 AA
molecular weight: 53343,66520 Da
isoelectric point:4,64928
aromaticity:0,07588
hydropathy:-0,22237

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WMM95025.1
1 514
Domain Start End Length (AA) Confidence
N-terminal 1 99 99 0,9857
Central domain 100 298 200 0,1549
C-terminal 299 514 215 0,9466
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-99
Central
100-298
C-terminal
299-514

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC304P
[NCBI] 		3072839 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidatus Pelagibacter
[NCBI] 		198251 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WMM95025.1 [NCBI]
Genbank nucleotide accession
OR420736.1 [NCBI]
CDS location
range 32746 -> 34290
strand +
CDS
ATGAAAGTCTATGGTTCATCTGGTTGGCAGAACGCAGGTTCATCAGTTAATGGAACTTCACAACGATATAATTACACAGCAACATCTGGTCAAACAACTTTCACAGGTGCAGACAACAATGGTAACACACTTACTTATGATGCAGGTTACATTGATGTTTATTTAAATGGTGTAAAATTATTAAATGGAACAGACGTTACAGTCACATCTGGTTCATCAGTTGTTTTAGCAAGTGGTGCAACTACTGGTGATGTAGTTGATATTGTTGCTTATGGAACTTTCTCAGTTGCAAGTCTAAACGCAGACAACCTAGATAGTGGTACAGTACCAGATGCAAGAATTACTGGTGCTTATACAGGTATTACTAATCTTACAATGTCTGGCGACTTAACAGTTGATACAAATACTTTAAAAGTTGATAGCACAAATAATAGAGTTGGTATTGGTACAAGTTCTCCAAGTGCTAATTTACACCTTAGAGAAATAACTTCTAATACAACAACTGCTTCAGACCAAGTAAAAATACAGGCAGAAAGCTCTGGTACTACTGGTGTAGGATTTGGAACTAACATTTTATTTCTTGGAGAAAGAAATGGTGGAACATTGCAAGGTATGGGTAGAATTGGTTATGTTGCAAGTACAAATACATCTTCAAATTTATCTTCTGACTTTGTTGTTCAAACTGCATCAGCAGGAACACCTACAGAACGTATGCGTATCGACAGTTCTGGAAATTTCATGGTGGGAACTACAGATAATACAATTTATGATAATACATCTGGTGGTGGTTTATGTTACAGACCATCATTATCATTAGACATTGCAAGAGAAGCAACATCTTCTGGTAACTATATGCTTTCTTTAAATAATACAGGAGTTGATGCAAAATTTATTAATTTTGGTAAAGATGGAACAGGAGTTGGTAGTATTGGTACTAAGGACACAGATTTAACTATAGGAAATGGTGGTGCTGGATTTTTATTTTTATCGTCAGAAAATAAAATAAGACCATTTAATGTTAGTACTAATTCAGCTACAGATAATGTACTTACTTTAGGCAGAAGTAATACTAGATTTGCAGACCTATACTTAGGTGGTGGTCTATATGTTGGTGGCACAGGCACAGCAAACAAATTAGAAGATTACGAAGAAGGAACTTATACTCCTACTTATTCAGCATCAGGTGGTGGTTCAGCTAATTATGCAGGTAGAACTGGTAATTATGTAAAAGTTGGAAAAATTGTTCACATACAAATAAGACTTATGACTACTACTGAATCTTTTAGTGGAGATATAACAGTAACAGGATTACCATTTACATCAGATAGTACATCATGGCATCAAACAGCACTTTCTATTAATGGTGCTAGATTAGGTACTGATATGCCTAATTTAAATGCGTATATTGTGAACAATGTAAGTGAAATTACATTGGAAAAAGGAGCAACAAATGCATATAGCGCTTCTCCTGTTACTGATGCTGACCTGGTTAATAATACTAATTATAATATTTTAAGAATAGCAGGAAGCTATGAAATATCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1599a77f3169660525065f4f967a64a0c148c26515b683bae0f0a48344ecb339
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7478
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50