Protein

View in Explore
Genbank accession
QEA10464.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MYRLKDIQKELATLVGWRQSYDRDAKIDESLTVSDSGVMFQDVHPLVTLRNIESIMPLDYYLRYPEYRDTDTYKTGDKVVYGKDVLTLRPDVWEAITENVGVEPSDGDNWKRYNPLSDYLRELNERAITNTVTRFINEKLIAGETKTLLERTNFFDGSGKINNEIDPTDSIVGYEILPVRSMGVTTKIEKIGLQFNKPGKVKLYLMHTSQVDPIKTFDLNYTKNGSYQWFDVGNDVLLPYMSEETSPGGLWYLCYDQKELPLGMYAINVSKDFSRDPCGTCNIGSVQAWRELTKYIRVSPYRVDSTQSEDGVKMWNIEMNMYTSAICYGLNVQLSVGCDITDFIIQSKYAFTHAVSLQMASYVLRELALNPNVRQNANQLNIDRETLLYEVDGNSQGRAQGIGYELKKAFEALSIDTKGMDRICLSCRNNGIRFKAT
Physico‐chemical
properties
protein length:437 AA
molecular weight: 49961,04920 Da
isoelectric point:5,17669
aromaticity:0,10297
hydropathy:-0,43066

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacteroides phage Barc2635
[NCBI] 		2596712 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bacteroides fragilis
[NCBI] 		817 cellular organisms > Bacteria > Pseudomonadati > FCB group > Bacteroidota/Chlorobiota group > Bacteroidota

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QEA10464.1 [NCBI]
Genbank nucleotide accession
MN078104.1 [NCBI]
CDS location
range 38239 -> 39552
strand +
CDS
ATGTACAGATTAAAGGATATACAAAAAGAACTTGCTACGCTCGTAGGATGGCGGCAGTCGTACGATAGAGACGCTAAGATAGACGAAAGTTTAACGGTGTCCGATAGTGGTGTTATGTTTCAAGACGTTCACCCACTTGTGACGCTAAGAAACATTGAATCTATTATGCCACTTGATTACTATTTACGTTATCCGGAGTATCGGGATACCGACACTTATAAGACGGGTGACAAGGTAGTTTACGGCAAGGACGTGTTAACGCTTCGTCCGGACGTATGGGAGGCAATAACAGAGAATGTTGGTGTAGAGCCTTCCGATGGTGATAACTGGAAACGGTACAACCCACTAAGCGATTATTTGCGTGAATTGAACGAAAGAGCGATCACCAATACCGTTACTCGCTTCATTAATGAAAAGTTGATTGCAGGGGAAACAAAGACGCTTTTAGAGCGTACAAACTTCTTCGATGGTTCGGGGAAGATAAATAACGAGATTGACCCTACCGATAGTATTGTAGGATATGAAATATTGCCAGTCCGTTCTATGGGGGTAACAACCAAGATCGAGAAGATAGGTTTGCAGTTTAACAAGCCGGGAAAGGTAAAACTTTACCTTATGCACACCTCACAGGTAGACCCGATTAAGACGTTCGATTTGAATTATACTAAAAATGGTTCTTATCAATGGTTTGATGTCGGTAACGATGTGTTACTCCCTTATATGTCTGAGGAAACTTCACCCGGTGGCTTGTGGTACTTGTGTTACGATCAAAAAGAATTGCCGTTGGGGATGTATGCTATAAACGTCTCTAAGGACTTTTCACGTGACCCGTGCGGTACTTGTAATATCGGAAGCGTGCAGGCGTGGAGAGAGCTAACAAAGTATATCAGAGTGTCACCGTATAGAGTTGACTCTACGCAGTCGGAGGATGGCGTAAAGATGTGGAATATAGAAATGAACATGTATACGTCTGCAATATGCTACGGTTTGAACGTTCAATTATCGGTAGGATGTGATATAACTGACTTTATCATTCAGTCTAAGTATGCCTTCACGCATGCCGTTTCTCTGCAAATGGCTTCTTATGTGCTGCGGGAGCTTGCATTAAATCCGAACGTTAGGCAAAATGCCAATCAATTGAATATCGACCGTGAAACGCTATTGTACGAAGTTGACGGAAACTCACAGGGACGTGCGCAGGGTATCGGATACGAACTAAAGAAGGCTTTTGAGGCTCTTTCTATTGATACAAAAGGGATGGATAGAATATGCCTTTCTTGCCGGAACAACGGGATAAGATTTAAAGCAACATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
f5a86f39ec414a1fd80db80ed38dba317c9431bf41848d259cd96cb1ab4d6664
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8445
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phase variable epigenetic modifications of the genome of a human gut symbiont Geva-Zatorsky,N., Ben-Assa,N., Coyne,M.J. Jr., Fomenkov,A., Livny,J., Muniesa,M., Jofre,J., Roberts,R. and Comstock,L.E. 2020-10-12 — GenBank