Protein

View in Explore
Genbank accession
CAM0043769.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,60
Protein sequence
MPPVIVAVAAGAAAYAAGATVIAAVTIAAAAAALYSVATMDIPSTPGTDPSTAKQTIRTPNQPCRRIFGTAMVGGVLSFAEEYLHKGGHEEEYQTCSWRPGGRDDRGDHTCRTRTRWVDTSTKYLHLVVVLAAHEVEDILEVYFGDELKTDWDHEFWKINVMKGDQTQWEHLPKILRDVPSWTNKMVGKGIAFVHVALKHSAKHFPNGIPSIKCLVKGTKLKTPFFNGFGNNAAACIYHYLRYQFGATEKMINTASFRNEFNVSNEVMGSEPEIGHPRKHPIRYAIDGAFDYDESHQNVLKKMLSACGGNLIFTNGQYYLQVAAYRGPVSSKQVITLDNLNGPLSISPDTPLNDRINIVQGQYLDPDSAYLQADFKPVTNPAYVAEDGGEERPYDADFEYVLNKHQAHRLANIILKDNRYGLTIKAPMNLSGFKFNAGLLVGLDDKSLGYDKLEFRIVNWRLDPKGGVQLTLKQTAADIYDDSTAPVTPKPPSTNIPDSSFCYPVERVTFDTFDDDGVYDGLLWWSHPDLSNVREFEVVAASAGGEILRFNTGKDTEYRLQNMRGVVYNITITAFNLYGAPSNPVTVVTKVGDPKPVTGVVFEPDNFEVVIKPTVSGIIPQNTRFAYFRANTPVPDNKDMTRIGEGVTFTDVGLIPNTAYHYFIQPLNGAAMGDLFGPYGTKTTDNPSDIYDLIKDEIPGTFTWVVYATDAFGAGISKTFDPAKHNFEGRAYNKAVEEPSLNPLDYTFFRIGEFISDAEQTILDNLKLGKTPDGTDDLVGEVAVKTIAAQEVDALKVLADWVKAHNIAAGAITADKIAVTVVAPVNNFTQFGDLRGWTVPSDSNLVDEVLLQSRKVKTLKIISGSVDKAATADKFSVDHNSIYEVRIALYSDQSTAATEQQFSMQSFDAKGSVVYTKAYHASTRRQAGSETTLEFWKGSVSGGLWRHMVVYIVGANADINAMPDCANVTYFAKLTPDVRDVSISAIALGSGNASTVHVYSPSVISVGSGVLSAFVIRAGALITSPKIVGGIVEGGVIKGGRIEGTTGEFEGTVKVGKLVGGVGLTSWGALELGWRMSWSVDGTPYKLIPKVRIRIPKEDFKRKGIITLYLSDVKASRDIRDRTAEGSGQGFNSLKLSASSAISVGGRIVDSNKTPTKVTGASNSLVMQRASGVLDPISLTYGITIDASAPNDKGVHDFYLCIHGDAGTKRLNYAFSIGWNATNATVILDKDNSDIIMSG
Physico‐chemical
properties
protein length:1239 AA
molecular weight: 134776,73590 Da
isoelectric point:5,94839
aromaticity:0,09443
hydropathy:-0,16949

Domains

Domains [InterPro]
DC_0187
STR
1–1026
DC_0187 DC_2102
IPR032876
ATT
295–460
IPR032876 IPR003961
IPR036116
STR
523–684
IPR036116
CAM0043769.1
1 1239
Architecture
STR
ATT
STR
RBD
STR 1-294 | ATT 295-460 | STR 461-1026 | RBD 1034-1211 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAM0043769.1
1 1239
Domain Start End Length (AA) Confidence
N-terminal 1 926 926 0,6896
Central domain 927 1125 200 0,1281
C-terminal 1126 1239 113 0,9970
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-926
Central
927-1125
C-terminal
1126-1239

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage K120 g1
[NCBI] 		3105393 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAM0043769.1 [NCBI]
Genbank nucleotide accession
OZ196273.1 [NCBI]
CDS location
range 62614 -> 66333
strand -
CDS
ATGCCACCAGTAATTGTTGCGGTTGCGGCAGGTGCCGCTGCCTACGCTGCGGGTGCTACGGTAATTGCTGCGGTAACTATCGCGGCTGCTGCGGCTGCTCTGTATTCCGTAGCCACCATGGATATCCCTAGCACTCCCGGTACTGACCCATCAACGGCCAAGCAAACCATACGAACACCTAACCAACCCTGTAGGCGGATATTCGGTACGGCCATGGTAGGCGGGGTATTGTCTTTTGCAGAAGAGTACCTACACAAAGGAGGTCATGAAGAAGAGTATCAAACCTGTAGTTGGCGTCCTGGTGGTCGCGACGATCGTGGTGACCACACCTGTAGGACCAGAACCCGTTGGGTAGACACTAGTACCAAGTACTTACACTTGGTCGTTGTTCTAGCGGCACACGAAGTTGAAGACATACTTGAAGTGTACTTTGGTGATGAACTAAAAACAGACTGGGATCACGAGTTCTGGAAAATTAACGTCATGAAAGGCGATCAGACACAGTGGGAACATTTACCGAAAATACTTCGTGATGTGCCGTCTTGGACTAACAAGATGGTAGGCAAGGGTATTGCGTTCGTCCACGTAGCGCTTAAGCACAGTGCAAAACATTTCCCTAACGGCATACCAAGCATCAAGTGTTTGGTAAAAGGTACCAAATTAAAAACACCATTCTTCAACGGTTTTGGTAATAACGCTGCGGCTTGTATTTATCACTACTTGCGCTACCAGTTTGGTGCTACAGAGAAGATGATAAACACGGCATCTTTCAGAAACGAGTTCAATGTTTCTAATGAAGTTATGGGTAGTGAGCCAGAAATAGGTCACCCACGTAAACACCCAATTCGTTACGCTATTGACGGAGCCTTTGATTACGATGAAAGTCACCAGAACGTTCTTAAGAAGATGCTTTCTGCTTGTGGCGGTAACCTAATATTTACCAACGGCCAGTACTACCTTCAGGTTGCTGCTTATCGTGGTCCAGTCTCGTCTAAGCAAGTGATCACGTTAGATAACTTGAATGGACCGTTAAGCATTTCACCAGATACACCACTTAACGACAGAATTAATATCGTTCAAGGTCAGTATTTAGACCCAGATTCCGCGTACCTTCAAGCTGACTTTAAACCGGTAACTAACCCTGCTTACGTTGCTGAAGATGGCGGCGAGGAAAGACCTTACGACGCAGACTTCGAATATGTTCTTAACAAGCATCAAGCACACAGACTGGCTAACATCATCTTAAAAGATAACCGCTACGGGCTGACTATCAAAGCGCCTATGAACCTAAGTGGTTTCAAATTCAATGCAGGCTTGTTGGTTGGTTTAGATGATAAATCGTTAGGCTATGACAAGCTTGAGTTTCGCATTGTTAACTGGCGTCTAGACCCTAAAGGTGGTGTGCAACTTACACTTAAACAAACTGCAGCCGACATCTATGATGACTCGACAGCACCAGTGACGCCTAAGCCGCCTTCTACCAATATCCCAGACTCAAGTTTCTGCTACCCAGTAGAACGGGTAACTTTTGACACGTTCGACGATGATGGCGTTTACGATGGCCTACTTTGGTGGTCTCACCCTGACTTGTCTAACGTTCGTGAGTTCGAAGTGGTTGCTGCTTCTGCAGGCGGTGAGATACTAAGATTCAATACGGGTAAAGACACTGAGTACCGATTACAGAATATGCGCGGTGTGGTTTACAACATCACAATCACAGCATTTAACTTATACGGTGCACCGTCTAATCCGGTCACTGTCGTAACGAAAGTGGGCGATCCTAAACCTGTCACTGGTGTAGTGTTCGAACCAGACAACTTCGAAGTGGTTATTAAGCCTACCGTGTCTGGCATTATTCCACAGAATACACGCTTTGCTTATTTCAGAGCCAACACACCTGTACCAGACAACAAAGATATGACAAGGATTGGCGAAGGTGTGACGTTTACGGACGTTGGGCTTATCCCTAACACGGCTTACCACTATTTCATTCAACCGCTTAATGGCGCTGCCATGGGTGATCTGTTTGGCCCGTATGGTACTAAGACTACGGATAACCCTAGCGACATTTATGATCTGATAAAGGACGAAATACCAGGGACATTCACTTGGGTGGTTTATGCAACTGACGCTTTTGGTGCGGGTATCAGCAAGACGTTTGACCCTGCTAAGCACAACTTCGAAGGTCGCGCGTATAACAAGGCAGTCGAAGAGCCTAGCTTAAATCCGTTGGATTACACGTTCTTCCGCATTGGTGAGTTCATTAGCGATGCAGAACAGACGATTCTTGACAACTTGAAGTTGGGTAAAACTCCTGACGGCACTGACGATTTGGTCGGTGAGGTGGCGGTTAAAACCATTGCCGCACAAGAAGTTGATGCGCTTAAAGTTTTAGCGGATTGGGTTAAGGCTCATAACATAGCAGCAGGGGCAATAACAGCCGACAAAATAGCGGTCACTGTGGTAGCACCAGTCAACAACTTCACTCAATTTGGAGACTTGAGAGGTTGGACAGTGCCTTCCGACTCTAACCTGGTTGATGAAGTTCTTTTGCAAAGTAGGAAGGTTAAAACCCTCAAGATCATTAGCGGAAGTGTTGACAAAGCGGCAACTGCCGACAAGTTCTCTGTTGACCACAACTCTATTTACGAAGTTCGTATCGCTCTGTATTCAGACCAATCTACCGCTGCAACTGAACAACAGTTCAGTATGCAGTCATTTGATGCGAAAGGGTCTGTGGTATACACAAAGGCGTACCATGCCTCCACTAGAAGACAGGCAGGAAGCGAGACTACTTTAGAGTTTTGGAAGGGTTCTGTCTCTGGCGGGTTGTGGCGTCATATGGTTGTTTATATTGTAGGAGCTAACGCAGACATTAACGCAATGCCTGACTGTGCCAACGTCACTTACTTTGCCAAGCTTACCCCTGATGTAAGGGATGTAAGCATATCGGCTATAGCGTTAGGTAGTGGAAACGCCAGTACGGTTCACGTCTACTCACCGTCAGTGATATCAGTAGGAAGTGGTGTTCTGTCCGCGTTTGTAATTAGGGCAGGCGCTTTAATAACTTCGCCTAAGATTGTAGGTGGTATAGTAGAAGGTGGTGTGATCAAAGGTGGCCGTATCGAGGGTACGACGGGCGAATTCGAAGGTACTGTTAAAGTTGGTAAGCTTGTCGGTGGTGTTGGTTTGACCAGTTGGGGAGCATTAGAACTTGGTTGGCGTATGAGTTGGTCTGTAGATGGCACCCCATATAAACTAATACCTAAAGTTAGAATTAGAATACCCAAAGAAGACTTTAAAAGAAAAGGGATAATCACTCTATACCTTTCAGACGTAAAAGCCAGTCGTGACATTAGGGACAGAACAGCAGAAGGTTCCGGTCAGGGTTTTAACTCTCTTAAACTCTCTGCCTCTTCGGCTATTAGTGTGGGTGGGCGTATTGTAGATAGTAACAAAACACCAACTAAAGTTACTGGTGCCAGCAACTCATTGGTTATGCAGAGAGCGTCAGGCGTATTAGACCCGATCTCATTAACATACGGAATTACGATAGACGCGTCTGCACCGAATGACAAAGGTGTGCACGACTTTTATTTGTGCATTCACGGTGATGCAGGTACTAAGAGGCTGAACTACGCATTTAGTATTGGTTGGAACGCTACTAACGCCACGGTCATCTTGGACAAGGACAACAGCGACATCATAATGAGTGGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2d1d5fcd2f7194afe7c8e8a1da26b8d5e4f635e6dbf9743c35d609edf6781c1b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6272
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50