Protein

View in Explore
Genbank accession
UYD57885.1 [GenBank]
Protein name
long-tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,82
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MADLKVGTTIGGSPVWHQGNLALVPSGNAILYKGARIYSENDKPSANELQVVSRDGDTMTGMLNVETSTDYQLALKSSVSGSAYIRFLNGNTLQSYIGTDAAGDFKVAMTDANGSWTFDGLKIAKSNGDVSLKGALVSTNTGNFDIKYGNVQFIRANSSKQLYIGAPGGTDLVLGYAQDGMTTTKIRIDSAVYNKTGGLLISNTGLIQRSAMDNPYYNQTEADARFIRLNTNTATNGYLLSKSSDMGTPHNLSMGYSGFFRHNGLGGFRGLTINVSHPDQSNGAHARGITFNYGSTGYGMYTYAYDSTGTKLANQKIYTEADKPTPAEIGALAAGANAVSASKLQYARTISLTGGATGSVSFDGSANASLAVTVTNDSHTHSDYVKKIGDTMSGNLTVPRVLLSAAQGAEANSVARRDFVESTVTASGKGVKDLFITLPAGAPATGYIPVMFRTNGTSNTFVFIDTLSSTSSYPMNNCSFIGNVRASGWTDSGSYAYGMFTIHSESERAIHSIHGPSESVNGFVVYVETRAFPITVRVDVGTTVTAYATDATYGTSVFKVNGQVSGNTKTVIFANFDKGTGTYNGSNRVYDTGYNPTPEAVGALPVNGNAVTASRLQTARLIAGVPFDGTSNISISATNVGAVNKTGDTMTGNLSVAADYLLVKKSSTFSGIRLRSTDVEAVAELLNDAGAITGAFGGNTETGRLNITRNNPGTGAYAYTYISCEPNGTVSSADAIVTILNPRSGTSQGTSENSLTRKDYVDGELSKKLNTAGGTVTGFLTLTSATNAMTIEASAGNSSYILGRTAGVSNWYVGRGGSSDDVYLNSHAHNNFLALKSDHVQLAKTLRAPGAVFSAEVEVNIGSGQRAAIIGGVTSGMMLRDSAGALTWYAYYEPTLNQYRIARYATGTYTDAPLIITATGETLLQRPRTQSGQELAVNALTRKDYVDGEIAKQVSKSGDTLTGNLTAPRFTMGTAQGTGAGDAVRYDFTSTQMPNRYVDIGPSKDLNTYQIPGFYIQPRNVDAQSGSNYPVNFAGALLVFKHAGICQIYITYSTDSGRRVYYRNFYSGTWSAWTTVYDTNFKPTASDVGAVAKTGDTMTGALYTPALRVADGNIDIYHGGPNQMLQFHNQGVAAAMIYQSSSNLIFCRGNGSWGNTNTWLVLNNSGADFNGIVAAPDFNVTSDRRLKSNFKAIDNPLSKVEQLTGQIYDKKLKDGAIVSEAGLIAQDVQKVQPMSVREGDDGMLSISPSGIVALLVEAVKELSERIKVLESK
Physico‐chemical
properties
protein length:1272 AA
molecular weight: 134630,22490 Da
isoelectric point:7,25148
aromaticity:0,08726
hydropathy:-0,21093

Domains

Domains [InterPro]
DC_1903
ATT
1–522
DC_1903 G3DSA:6.20.80.10 DC_0406
DC_1592
STR
444–831
DC_1592 cd19958 IPR030392
IPR048388
ATT
788–856
IPR048388 IPR030392 Coil
UYD57885.1
1 1272
Architecture
ATT
STR
ATT
STR
ATT 1-522 | STR 523-787 | ATT 788-856 | STR 857-1272
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UYD57885.1
1 1272
Domain Start End Length (AA) Confidence
N-terminal 1 395 395 0,0749
Central domain 396 594 200 0,5357
C-terminal 595 1272 677 0,7742
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-395
Central
396-594
C-terminal
595-1272

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage avDM4
[NCBI] 		3101597 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYD57885.1 [NCBI]
Genbank nucleotide accession
OP380596.1 [NCBI]
CDS location
range 8068 -> 11886
strand -
CDS
ATGGCAGATTTAAAAGTTGGAACCACGATCGGTGGTTCACCTGTTTGGCACCAAGGCAATCTTGCGCTGGTACCAAGCGGTAATGCTATCCTGTACAAGGGAGCAAGAATTTATTCTGAAAACGATAAACCGAGCGCAAATGAACTTCAGGTAGTATCTCGTGACGGCGATACTATGACTGGTATGCTGAACGTTGAAACTTCCACTGATTACCAATTAGCGCTTAAATCGAGTGTTAGTGGTTCTGCTTATATTCGTTTTTTAAATGGAAATACGCTCCAGTCATATATTGGAACTGATGCTGCCGGTGACTTTAAAGTCGCAATGACTGACGCCAACGGCTCATGGACATTTGATGGGCTTAAAATCGCTAAATCTAACGGCGATGTTTCTCTGAAAGGGGCGTTGGTATCCACTAATACTGGAAACTTTGATATAAAGTATGGAAACGTACAGTTCATTCGCGCAAACTCGTCTAAACAACTCTATATTGGCGCTCCAGGCGGAACTGATTTGGTGCTCGGTTATGCTCAAGATGGCATGACTACCACCAAGATTCGTATTGATTCTGCGGTATATAATAAAACCGGCGGACTTTTGATTAGCAATACCGGGCTTATTCAGCGTTCTGCTATGGATAACCCATACTATAATCAGACCGAGGCTGATGCAAGATTTATCAGACTGAACACCAATACTGCGACTAATGGTTACTTGCTGAGCAAATCGTCTGATATGGGAACACCGCATAACCTGTCAATGGGTTATTCTGGATTCTTCAGACACAATGGCCTGGGCGGATTCCGCGGATTGACTATTAATGTTTCTCACCCGGACCAAAGTAACGGTGCACATGCCCGCGGTATTACTTTCAATTACGGAAGTACTGGCTATGGCATGTACACATATGCGTACGACTCAACAGGCACTAAATTAGCAAACCAAAAGATTTATACAGAAGCTGATAAACCTACTCCTGCAGAAATTGGTGCATTAGCTGCAGGTGCAAATGCCGTATCTGCATCCAAGTTGCAATACGCCAGAACTATCAGTTTGACCGGTGGCGCAACTGGTTCAGTATCGTTCGATGGTAGTGCAAATGCTTCTCTAGCAGTGACAGTAACAAACGACAGTCATACACACTCCGATTACGTTAAAAAAATCGGCGACACCATGTCTGGCAATTTGACTGTTCCGAGAGTTCTTTTGTCTGCTGCGCAAGGCGCCGAAGCTAATTCTGTGGCACGTCGTGATTTCGTTGAATCGACTGTTACTGCTTCCGGTAAAGGTGTTAAAGATCTTTTCATCACACTTCCTGCTGGAGCACCTGCAACTGGCTACATCCCGGTTATGTTTAGAACAAATGGTACATCCAACACATTTGTCTTTATTGATACTTTATCCAGCACATCATCGTATCCGATGAACAATTGTTCATTTATAGGCAATGTTCGTGCCAGCGGATGGACTGATAGCGGAAGTTATGCCTATGGCATGTTTACGATTCATTCTGAATCAGAAAGAGCAATTCACTCAATCCACGGACCATCTGAGAGCGTAAATGGGTTTGTTGTTTACGTTGAAACACGTGCTTTCCCGATAACAGTAAGAGTCGATGTCGGAACAACTGTCACTGCTTATGCTACTGATGCTACATATGGGACATCTGTCTTTAAGGTTAATGGCCAAGTAAGTGGAAATACAAAAACCGTTATTTTTGCAAATTTCGATAAAGGAACTGGGACTTATAACGGAAGCAATCGTGTTTATGACACCGGATATAACCCAACTCCAGAAGCAGTAGGAGCTCTTCCAGTCAATGGTAATGCTGTAACAGCTTCTAGATTGCAGACAGCTAGACTTATTGCCGGTGTTCCGTTTGATGGTACATCGAATATTTCGATTTCTGCAACTAACGTAGGCGCGGTTAATAAAACTGGCGATACAATGACTGGGAACCTGAGCGTCGCAGCGGATTACCTTCTGGTAAAGAAGTCCTCCACTTTCTCTGGCATAAGACTTCGCAGTACAGACGTCGAAGCAGTAGCTGAATTACTGAACGACGCTGGAGCTATCACTGGCGCGTTCGGTGGAAATACAGAAACTGGCCGCTTGAATATTACTCGGAACAACCCGGGTACAGGAGCGTACGCGTACACCTATATCTCTTGCGAGCCGAACGGGACCGTCTCCTCAGCAGACGCCATTGTAACCATCCTCAACCCTAGAAGTGGAACTTCCCAGGGAACTTCAGAAAACTCCCTGACCCGCAAAGACTACGTTGACGGGGAGTTGAGCAAGAAGCTTAACACTGCCGGCGGCACTGTAACTGGCTTCCTAACCCTGACAAGCGCAACCAACGCGATGACTATCGAAGCTTCTGCCGGTAACTCGTCCTACATCCTTGGACGCACAGCGGGAGTGTCTAATTGGTATGTCGGGCGCGGCGGTTCCAGCGACGATGTATACTTGAACAGCCACGCCCATAACAATTTCCTGGCGCTCAAATCTGACCATGTGCAACTTGCTAAGACGCTTCGAGCTCCAGGAGCAGTGTTCTCGGCAGAAGTAGAGGTTAATATTGGAAGTGGCCAGAGAGCCGCAATCATTGGAGGTGTGACCTCCGGGATGATGCTACGGGACAGCGCAGGAGCTCTCACGTGGTATGCTTATTACGAGCCTACCCTAAACCAGTATCGAATTGCAAGGTACGCAACAGGCACATATACCGACGCCCCGTTGATCATCACCGCCACTGGAGAAACTTTACTGCAGCGCCCGAGGACGCAATCTGGCCAAGAACTTGCAGTTAACGCGCTAACTCGGAAGGACTATGTTGATGGTGAAATAGCTAAACAGGTATCCAAGTCTGGCGATACATTGACCGGTAACCTGACTGCGCCTAGGTTCACTATGGGTACCGCGCAAGGAACTGGTGCCGGTGATGCTGTGCGTTATGATTTCACCAGTACTCAAATGCCAAATCGGTACGTCGATATTGGGCCAAGTAAAGACCTCAACACATACCAAATACCTGGGTTCTATATACAACCTAGAAATGTTGATGCTCAATCAGGCAGCAATTACCCGGTAAATTTTGCGGGTGCTTTGTTAGTATTTAAACATGCTGGCATCTGCCAGATCTACATCACATATTCAACTGATAGCGGTCGGCGCGTTTACTACAGAAACTTTTACAGCGGTACCTGGTCAGCGTGGACTACAGTATACGACACTAACTTCAAACCAACAGCATCCGATGTAGGGGCAGTAGCTAAAACTGGCGATACAATGACCGGTGCTCTGTATACCCCAGCTCTTAGGGTCGCTGATGGTAATATAGATATATACCATGGCGGACCAAACCAGATGCTACAATTCCATAACCAGGGTGTAGCTGCTGCGATGATATATCAATCTAGCAGTAACTTGATATTCTGTCGAGGTAATGGGTCTTGGGGCAATACAAACACATGGCTTGTGTTGAACAACAGTGGAGCCGATTTTAACGGAATAGTAGCTGCTCCCGATTTTAACGTTACGTCAGATCGTAGATTGAAATCCAACTTCAAAGCTATAGATAATCCGCTATCTAAGGTTGAACAGTTGACCGGCCAAATATATGATAAAAAACTAAAGGATGGTGCAATAGTTAGTGAAGCGGGGCTTATTGCACAGGATGTGCAAAAGGTTCAACCCATGTCCGTTAGAGAAGGTGACGATGGTATGCTGTCAATATCTCCTTCCGGCATCGTTGCTCTTTTGGTTGAAGCAGTGAAGGAACTTTCTGAAAGGATAAAAGTTTTGGAAAGTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ff8606cc2b839620cc016e1ff63ad712990ef3c6d7f77491c4fbc19a4bfd4ec1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5549
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
On Diversity and Genetic Richness: Insights on Aeromonad Phage Diversity through Physicochemical and Molecular Analysis Papa,D.M., Rousseau,G., Tremblay,D., Labrie,S., Gutierrez,T.A., Ramos,J.D. and Moineau,S. 2024-03-24 — GenBank