Protein

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Genbank accession
YP_004934530.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,58
Protein sequence
MSKTRQIAKNVGRIVKYDALTKVDNNLLASNNAEYTNDKMVADFISAGGTATIASNTYEFNNKFIGKTISMTARNGFHYILLTPVDSGVFVIDGDFIIKDNTNKIRTFSTCANIGVSSIARANLENASSNDTVMFVTYQSKTWVAIQIETTVDAEVYFSGFISVSIETTDITITTSDFIGSKSVIYKNNISNSKWDTVEMNMLHVAPGMTNMTTLKDGNVFFLEMDSPAANSTAGNNSNGASGLGGGTLKTWNNAWIINPYTGEMRKTARFPWFPINNSKCVTLADGDVLVFFGYSVIAGATIPNQNLTPAILNELRPYPKYVYRYSPKTELWSIETKSPTVSGWDKYGLAIHPDGKNIVIMGGVLGYNSALNTSIDVNTYRPYYRYPFIYNTETKKWTKAGKDTANYFIPRSDTVFSNFDMRVVHLVDNLFFVHAFDSCAFNGGDLYNNPKNYIWDMNSYLFTPVTGNPLQCTVPVLEKLSDNRVAIIGGYKPGVNFNSYLNRDNYANTNLAMTIYDHTTKTFSALSSAPISLAICPSTKLNDGRLMIGQPSIVPSYNSTTKVTTQNITGQSFFFYDDNKYHYNTLGVWEIDAIIPSSIMNVYDSSADLKDNTSAATANYIDYISECMGRDANGNLLFGGFYGFDYTNNCMYSSKRWYSYKKSTGINRLSDNQLFPGGQVPLVPCSPNEMIMLGGYGRPSNYPTSWSDTMSSRFYKLNLSTNTWSLSNVSVENLGIAFADGSAVRINDGRIFYGLCNNEAKGIGYSSTSERLYCYNPATDSVTRMADCPYKIRTTAFVYDNVNERIYVFNTLNDQPNRKIYYNILTNTWTDTGKLYPDARYTAGCLSATNPNEMFILNYERAIKYNLVDDSYTVIPHPSQFVMDLIKNTAALYGFVNYSTGSAFSVIYKYVSLNDGLAKNIIMTYKP
Physico‐chemical
properties
protein length:928 AA
molecular weight: 103488,29370 Da
isoelectric point:7,03373
aromaticity:0,12931
hydropathy:-0,24558

Domains

Domains [InterPro]
IPR015915
STR
234–574
IPR015915 IPR015915
IPR015915
STR
247–549
IPR015915 IPR015915
IPR015915
STR
655–882
IPR015915
YP_004934530.1
1 928
Architecture
STR
STR
STR 234-574 | STR 595-882 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_004934530.1
1 928
Domain Start End Length (AA) Confidence
N-terminal 1 33 33 0,9222
Central domain 34 319 287 0,8849
C-terminal 320 928 608 0,0819
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-33
Central
34-319
C-terminal
320-928

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage phiR1-37
[NCBI] 		331278 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Yersinia enterocolitica
[NCBI] 		630 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_004934530.1 [NCBI]
Genbank nucleotide accession
NC_016163 [NCBI]
CDS location
range 217921 -> 220707
strand -
CDS
ATGTCTAAGACAAGACAGATAGCTAAGAACGTTGGTAGAATAGTAAAATATGACGCTTTAACTAAAGTGGATAATAATTTATTAGCTTCTAATAATGCCGAATACACAAATGATAAAATGGTAGCTGACTTTATCTCTGCCGGAGGTACTGCTACCATTGCAAGTAATACTTATGAATTTAATAATAAGTTTATTGGTAAAACTATCTCAATGACTGCTAGAAATGGTTTCCATTATATTCTATTAACTCCTGTAGATTCAGGTGTTTTTGTAATTGATGGCGATTTTATTATTAAAGATAATACTAATAAAATTAGGACTTTTAGCACTTGTGCAAATATAGGCGTTAGCTCTATTGCAAGAGCTAATTTAGAAAATGCTTCCAGTAATGATACGGTAATGTTCGTTACTTATCAAAGTAAAACTTGGGTGGCTATTCAGATTGAAACCACTGTGGATGCAGAAGTATATTTCTCTGGATTTATTTCAGTTTCTATAGAAACTACTGATATAACTATTACGACTTCTGATTTCATTGGAAGTAAATCAGTAATTTATAAAAATAATATTAGTAATTCTAAATGGGATACTGTGGAAATGAACATGTTACATGTCGCTCCAGGCATGACTAACATGACTACTTTAAAAGATGGTAATGTATTCTTCTTAGAAATGGATTCGCCAGCGGCTAATAGTACTGCAGGGAACAACTCTAACGGTGCTAGTGGCTTGGGAGGCGGAACTTTAAAAACTTGGAATAATGCATGGATCATCAACCCATACACTGGAGAAATGAGAAAAACTGCTAGATTTCCTTGGTTCCCGATTAATAACTCAAAATGTGTCACGTTGGCAGATGGTGATGTACTGGTATTCTTCGGTTATAGTGTTATTGCGGGAGCCACTATTCCCAATCAGAACCTTACGCCAGCTATACTAAATGAGTTAAGGCCTTACCCTAAATACGTTTATCGATATTCCCCTAAAACTGAATTATGGTCTATAGAAACTAAATCGCCTACAGTAAGTGGATGGGATAAGTATGGTCTAGCTATCCATCCGGATGGAAAAAATATTGTAATTATGGGTGGGGTGTTGGGCTATAACTCTGCACTTAATACATCAATTGATGTCAACACATATAGACCATACTATAGATATCCATTTATTTATAATACCGAAACTAAGAAATGGACTAAGGCTGGTAAAGATACTGCTAATTACTTTATTCCTAGATCAGACACGGTATTTAGTAATTTTGATATGAGAGTAGTACATCTTGTAGACAATCTTTTCTTTGTTCATGCATTTGATTCGTGTGCATTCAATGGCGGAGATCTATACAATAACCCTAAAAACTATATTTGGGATATGAATTCATATCTATTCACTCCTGTAACTGGAAATCCATTACAATGTACTGTACCTGTATTAGAGAAGTTATCTGATAATAGAGTGGCTATAATCGGTGGATATAAACCAGGTGTTAACTTTAATTCTTATCTAAATAGGGACAATTACGCTAATACAAACTTAGCTATGACTATCTATGATCATACTACCAAAACCTTCTCAGCTCTATCTTCTGCACCAATTAGTTTAGCTATTTGTCCATCCACTAAATTAAATGATGGCAGATTAATGATAGGACAACCTTCTATCGTTCCATCATATAATAGTACCACTAAAGTAACTACTCAAAATATAACGGGTCAGTCTTTCTTCTTCTATGATGACAACAAGTATCACTATAACACTTTAGGCGTTTGGGAAATAGATGCGATCATCCCCTCCAGTATTATGAACGTATATGATTCTTCAGCGGATTTAAAGGATAACACATCTGCTGCAACTGCAAACTATATAGATTATATAAGTGAATGTATGGGAAGAGATGCAAACGGTAATCTACTGTTTGGAGGGTTTTATGGGTTCGATTATACTAATAATTGCATGTATTCTAGTAAACGTTGGTATTCGTATAAAAAATCTACTGGAATAAATAGATTATCCGACAATCAGTTATTTCCAGGCGGTCAAGTCCCTCTAGTACCATGTAGTCCTAATGAAATGATAATGTTAGGTGGTTATGGAAGACCAAGTAATTATCCAACTAGCTGGAGCGATACAATGTCTTCTCGTTTTTATAAACTAAATCTTTCTACTAATACATGGTCATTATCTAATGTATCGGTAGAAAATCTAGGTATTGCTTTTGCTGATGGTAGTGCAGTAAGAATTAATGATGGAAGAATTTTTTATGGGCTTTGTAATAATGAAGCCAAAGGTATAGGTTACTCTTCAACTTCTGAAAGACTTTATTGTTATAATCCAGCTACAGATTCTGTAACTAGAATGGCTGACTGCCCATATAAAATACGTACCACTGCTTTTGTTTACGATAATGTAAATGAAAGAATATATGTATTTAATACCTTAAACGATCAACCTAATAGGAAGATATACTATAATATTTTAACTAATACTTGGACTGATACTGGAAAATTATATCCGGACGCCAGATATACTGCTGGGTGTTTATCGGCTACAAACCCAAATGAGATGTTTATCCTTAACTATGAACGGGCTATTAAGTACAATTTAGTAGATGATTCGTATACCGTTATCCCTCATCCATCTCAGTTTGTAATGGACTTAATAAAGAATACTGCTGCACTTTATGGATTTGTGAATTATTCTACCGGATCAGCATTTAGCGTTATTTACAAATATGTAAGTCTGAATGATGGTTTAGCCAAAAACATTATTATGACTTACAAACCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8b885f2ec693d302a406b04a555020d9c9a834dad28b4e1b245daae628bae2d1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6173
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50