Protein

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Genbank accession
QOC59570.1 [GenBank]
Protein name
tail needle knob protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MADSNLNEPVIIQATRLDTSVLPRNIFSQSYLLYVIAQGADVGNVANKANEAGQGAYDAQVRNDEQDVILADHEQRISAAEATLVNHEERISQAESTLQEHETRIAQNESDIASLDTRVQSLESQVSDHETRIDALEYATTRKKSEVVYSGVSVTIPTAPTNLVSLLKTLTPSSGTLALFFDTVNNKMVVFNENKTLFFKLSIVGTWPSGTANRSMQLTFSGSVPDTLVSSRNAATTTDNILLATFFSVDKDGFLATNGSTLTIQSNGAAFTATTIKIIAEQ
Physico‐chemical
properties
protein length:282 AA
molecular weight: 30510,53300 Da
isoelectric point:4,69390
aromaticity:0,06028
hydropathy:-0,16596

Domains

Domains [InterPro]
G3DSA:1.20.5.340
STR
37–124
G3DSA:1.20.5.340 IPR038681
SSF57997
STR
40–140
SSF57997
SSF57997
STR
50–140
SSF57997
Coil
Unmapped
70–139
Coil
IPR032395
RBD
108–282
IPR032395
QOC59570.1
1 282
Architecture
STR
STR 37-282
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoP_Kapi1
[NCBI] 		2746235 No lineage information
Host Escherichia coli MP1
[NCBI] 		1314835 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Escherichia > Escherichia coli

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QOC59570.1 [NCBI]
Genbank nucleotide accession
MT813197 [NCBI]
CDS location
range 27100 -> 27948
strand +
CDS
ATGGCTGATTCGAATCTCAATGAGCCGGTAATCATTCAGGCTACACGACTCGACACATCAGTCCTTCCACGCAATATCTTCTCGCAGTCATATCTGCTGTACGTTATCGCACAGGGTGCTGATGTTGGTAACGTGGCTAACAAGGCCAACGAGGCCGGACAGGGCGCTTATGATGCACAGGTCAGGAACGATGAGCAGGATGTGATTCTCGCTGACCATGAGCAGCGAATTTCTGCTGCGGAAGCAACGCTTGTTAATCATGAGGAGCGAATCAGCCAGGCAGAATCAACTCTTCAGGAACATGAAACGCGAATCGCTCAGAATGAAAGCGATATTGCGTCGCTTGATACCAGAGTTCAGTCGCTGGAATCGCAGGTTTCAGACCATGAAACGCGCATCGATGCTCTGGAGTATGCCACTACTCGCAAGAAGTCAGAGGTTGTTTACTCTGGCGTATCTGTAACCATCCCGACAGCGCCGACCAACCTTGTTAGCCTGCTGAAAACGCTCACGCCGTCATCCGGGACGTTGGCACTATTCTTTGACACTGTTAACAACAAGATGGTTGTGTTCAACGAGAACAAAACCTTGTTCTTCAAGCTGTCGATCGTCGGGACGTGGCCCAGCGGAACCGCCAACAGGTCAATGCAGCTAACCTTTTCCGGCTCTGTTCCTGACACGTTGGTCAGCAGTCGTAATGCGGCGACAACAACCGATAACATCTTGTTAGCTACGTTCTTCAGCGTGGATAAAGACGGCTTTCTTGCCACAAATGGCAGCACGTTAACCATTCAGTCAAATGGTGCGGCGTTTACTGCCACAACCATCAAAATCATTGCGGAGCAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
6d14798151eeb819e3f6869d4cb7ad2dbf5fe3cf4fd8dbc44fbce61b336b364c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7813
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50