Protein

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Genbank accession
UYD60887.1 [GenBank]
Protein name
tail tubular protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MALISQAIKNLKGGISQQPDILRYPDQGARQVNGWSSESEGLQKRPPMVFIKTLGDQAALGQSPYIHLINRDEYERYYVVFTGSGIRVFDLAGNEKAVRYSANKAYITTATPREDLRMVTVADYTFIVNRNYMVASGGDTNMPGFNPKQDALINVRGGQYGRTLQVMINGGTQATYQIPNGDNPEHVKNTDAQWLAEELAKQLRVNLPTWSFTVGQGYIHIVAPAGQQIDSLVTKDGYADQLISPVTHYSQTFTKLPLNAPDGYIVKIVGDTAKSADQYYVKYDASRKVWSEVVGWNVEVNLRAETMPHALVRAADGNFEFKTLSWSDRKCGDNDTNPWPSFVGSTINDVFFFRNRLGFLTGENIVLSRTGKYFNFFPASVANLSDDDPIDVAVSVNRISILKYAVPFSEELLIWSDETQFVLTSAGTLTSRSVELNLTTQFDVQDQARPYGIGRNVYFASPRSSFTSISRYYAVQDVSSVKNAEDITAHVPNYIPNGVFAICGSGTENFCSVLTDGDPSKIFIYKFLYLNEELRQQSWSHWDFGPNVQVLACQAIGSDMYVVMRNQYNTFMSRISFTKNAIDIVGEPYRAYLDFKVAYTIPAGTYNDDTYETTINLSTLYGARFDRGKVTLLEPDGRAHIFEDPDGGWANEPLIRLTGNMEGKRVFLGFNFTFLYEFSKFLIKQTADDGSTATEDIGRLQLRRAWVNYEDSGTFDIYVENQSSNWKYTMAGGRLGSNSLRASKLNLGTGQYRFPVAGNAKFTTVFITSDEATPLNVIGCGWEGNYLRRSSGI
Physico‐chemical
properties
protein length:793 AA
molecular weight: 88671,32270 Da
isoelectric point:5,53722
aromaticity:0,12232
hydropathy:-0,31349

Domains

Domains [InterPro]
IPR058003
TTP
1–793
IPR058003
UYD60887.1
1 793
Architecture
TTP
TTP 1-793
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UYD60887.1
1 793
Domain Start End Length (AA) Confidence
N-terminal 1 142 142 0,9914
Central domain 143 347 206 0,2242
C-terminal 348 793 445 0,2062
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-142
Central
143-347
C-terminal
348-793

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage avDM11-UST
[NCBI] 		3101607 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYD60887.1 [NCBI]
Genbank nucleotide accession
OP380607 [NCBI]
CDS location
range 25703 -> 28084
strand +
CDS
ATGGCTCTAATTTCTCAAGCCATTAAGAACTTGAAGGGTGGTATCAGTCAACAGCCTGACATCCTTCGCTATCCCGACCAAGGCGCTCGCCAAGTCAATGGGTGGTCTTCGGAGTCTGAGGGTCTTCAAAAGCGCCCTCCTATGGTGTTCATCAAGACCCTTGGCGACCAAGCCGCTTTGGGCCAGTCTCCGTACATCCACTTGATTAACCGTGACGAATACGAGCGGTACTACGTTGTGTTCACTGGCAGCGGTATCCGAGTGTTCGACCTTGCGGGCAACGAGAAGGCTGTCCGGTACAGTGCGAACAAAGCGTACATCACCACGGCAACTCCAAGGGAAGACCTTCGGATGGTAACGGTGGCTGACTACACGTTCATCGTGAACAGGAACTACATGGTTGCTTCCGGTGGCGACACCAACATGCCGGGGTTCAACCCTAAGCAGGACGCCCTGATTAACGTTCGAGGCGGCCAGTACGGACGAACTCTGCAAGTGATGATTAACGGGGGAACTCAGGCGACCTACCAGATTCCCAATGGTGACAACCCTGAGCACGTTAAGAATACCGATGCCCAATGGCTGGCCGAGGAACTAGCCAAGCAGTTGCGAGTCAACCTCCCTACGTGGTCATTCACAGTCGGCCAAGGGTACATCCACATCGTGGCCCCTGCTGGCCAACAGATTGATTCCCTTGTGACGAAGGATGGTTACGCTGACCAGCTAATCAGCCCTGTGACTCACTACTCCCAGACCTTCACTAAGTTGCCACTCAACGCTCCCGATGGATACATCGTGAAGATTGTTGGGGACACCGCTAAGTCTGCCGACCAGTATTACGTGAAGTACGATGCGTCCCGTAAGGTCTGGTCTGAGGTTGTTGGGTGGAACGTGGAGGTTAACCTTCGGGCCGAGACGATGCCACATGCGCTCGTTCGGGCTGCTGACGGTAACTTCGAGTTCAAGACTCTGAGCTGGTCTGACCGGAAGTGCGGTGACAACGACACTAACCCGTGGCCCTCCTTTGTTGGCTCGACCATCAACGATGTGTTCTTCTTCCGTAACCGTCTGGGATTCCTGACTGGCGAGAACATCGTGCTAAGTCGAACCGGTAAATACTTCAACTTCTTCCCTGCGTCCGTTGCGAACCTTAGCGATGATGACCCGATTGACGTTGCTGTGAGTGTGAACCGGATTTCCATCTTGAAGTACGCCGTTCCGTTCTCTGAGGAGCTGCTGATTTGGTCTGACGAGACTCAGTTCGTGTTGACCTCTGCGGGAACCTTAACGTCCCGTTCGGTTGAGCTGAACCTGACCACTCAGTTTGATGTGCAAGACCAAGCGCGGCCCTATGGGATTGGCCGTAACGTGTACTTTGCGAGCCCACGGTCTAGCTTTACGTCCATCAGCCGTTACTATGCAGTGCAGGATGTAAGTTCCGTGAAGAACGCCGAGGACATTACCGCCCACGTCCCGAACTACATCCCGAATGGTGTGTTCGCCATCTGCGGCTCTGGCACCGAGAACTTCTGCTCAGTGTTGACCGATGGAGACCCTAGCAAGATTTTCATCTACAAGTTCCTGTACCTCAACGAGGAGCTTCGCCAACAGTCTTGGTCTCACTGGGACTTTGGGCCGAACGTTCAGGTACTCGCTTGTCAAGCTATCGGGTCTGACATGTACGTGGTGATGCGGAACCAGTACAACACCTTTATGTCTCGAATCTCTTTCACTAAGAACGCCATCGACATCGTTGGGGAGCCTTACCGAGCCTATCTGGACTTCAAGGTTGCCTACACGATTCCCGCTGGTACTTACAACGACGATACCTACGAGACAACCATCAACCTCTCGACCCTCTACGGTGCTCGTTTTGACCGTGGCAAGGTGACGCTTCTGGAGCCTGATGGTCGTGCCCACATCTTTGAAGACCCCGATGGCGGCTGGGCCAATGAGCCGCTGATTCGCCTAACGGGTAACATGGAGGGCAAGAGGGTGTTCCTTGGGTTCAACTTCACGTTCCTTTACGAGTTCTCCAAGTTCCTCATTAAGCAGACCGCCGATGACGGTTCAACCGCTACCGAGGACATTGGGCGACTCCAACTGCGAAGGGCATGGGTGAACTACGAGGACTCTGGCACCTTCGACATTTACGTGGAGAACCAATCGTCAAACTGGAAGTACACGATGGCTGGTGGCCGCTTGGGCTCCAACTCACTGAGGGCCAGTAAGTTGAACCTTGGCACGGGCCAGTACCGATTCCCTGTAGCGGGGAACGCCAAGTTCACTACGGTCTTCATCACGTCTGACGAGGCCACGCCGCTGAACGTTATCGGCTGTGGCTGGGAGGGCAACTACCTGCGCCGGAGTTCCGGCATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
53717cbab6a59135635373d2c395a2bbb64715729307f16d3f2a60ee022c2f57
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3217
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
On Diversity and Genetic Richness: Insights on Aeromonad Phage Diversity through Physicochemical and Molecular Analysis Papa,D.M., Rousseau,G., Tremblay,D., Labrie,S., Gutierrez,T.A., Ramos,J.D. and Moineau,S. 2024-03-24 — GenBank