Protein

View in Explore
Genbank accession
XSB41408.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MTKKPWRAGKDLSAVVENMEIGTGQRGDGRHAFVTREELVGLKLARRRTSGGAAYALNPGIEMDSSVMVVDFPSKPQNFKATGGFGSVLLEWDMPNYRGHSLTEIWRGTEDDLSDAVLVATTPGQVYGDPVDPGWSGFYWIRFVNAAGVKGPWNAVKGTPAQTQISVQAIIDQIKEEAAKSPVVEELRKEIKNAQGQAVKDAAIETTEVVGNLREETLKTIGGIDTRVTGMNKSTSEELNKVNERITKVDKEGGEAFLAMWSKKTGVEGITAGIGIVAGKDGEGKPVSQVAISASQLFVFDPNNPDNTAYPFVVSGGKVVIPKAMIYDAVIETLVSRKVVADEVKAGVSITSPVIRSAVIQNGNFQVDSQGNLNIGGLFSVTSQGQLTIRYSNQNVGLVIRNDKIEVYDQNGRLAVRIGRLS
Physico‐chemical
properties
protein length:422 AA
molecular weight: 45393,88770 Da
isoelectric point:6,28994
aromaticity:0,06398
hydropathy:-0,23460

Domains

Domains [InterPro]
DC_1230
STR
49–422
DC_1230
IPR053171
Unmapped
72–216
IPR053171 Coil IPR015406
IPR013783
STR
77–169
IPR013783
XSB41408.1
1 422
Architecture
STR
STR 49-422
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage PhiR5_2
[NCBI] 		3416468 Viruses >
Host Escherichia coli str. K-12 substr. MG1655
[NCBI] 		511145 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XSB41408.1 [NCBI]
Genbank nucleotide accession
PV340546.1 [NCBI]
CDS location
range 42111 -> 43379
strand +
CDS
ATGACAAAAAAACCGTGGCGCGCAGGAAAGGATTTATCTGCGGTTGTGGAAAATATGGAGATAGGGACAGGACAACGTGGCGATGGTCGTCATGCTTTTGTAACCCGTGAAGAACTGGTCGGTCTGAAGCTGGCCCGTCGCCGGACTTCAGGTGGTGCCGCATATGCCCTTAATCCGGGGATTGAGATGGACAGCTCTGTAATGGTCGTTGATTTCCCATCGAAACCTCAGAATTTTAAGGCGACAGGGGGATTTGGCTCGGTACTGCTTGAATGGGATATGCCGAATTATCGCGGTCATTCACTGACTGAAATCTGGCGGGGTACGGAGGATGACCTTTCGGATGCGGTGCTGGTTGCCACGACGCCGGGGCAGGTTTACGGTGATCCGGTTGATCCGGGCTGGTCGGGATTCTACTGGATACGCTTTGTTAATGCAGCGGGAGTGAAAGGGCCATGGAACGCGGTAAAAGGCACTCCCGCACAAACCCAGATAAGCGTTCAGGCCATTATTGACCAGATCAAGGAGGAGGCTGCAAAGTCACCGGTGGTGGAAGAGCTGCGTAAGGAAATAAAGAATGCTCAGGGGCAGGCAGTAAAGGACGCGGCAATCGAGACGACGGAAGTTGTGGGTAATCTCAGGGAAGAAACACTGAAAACTATCGGTGGTATTGATACCCGTGTTACGGGGATGAATAAGTCAACCAGTGAAGAGCTTAATAAGGTAAATGAGCGCATCACTAAGGTGGATAAAGAAGGCGGTGAAGCTTTCCTGGCCATGTGGTCAAAAAAGACCGGTGTTGAGGGAATTACTGCGGGGATCGGAATTGTTGCAGGAAAAGATGGTGAAGGGAAGCCGGTAAGCCAGGTTGCAATTTCGGCATCGCAGTTGTTTGTCTTTGACCCGAACAACCCGGATAACACAGCCTATCCCTTTGTGGTGTCAGGTGGAAAAGTTGTTATTCCCAAAGCGATGATTTATGACGCGGTGATTGAAACACTGGTGTCGCGGAAGGTTGTGGCGGATGAGGTAAAAGCCGGGGTAAGTATCACTTCGCCAGTTATCCGGAGTGCCGTTATTCAGAACGGGAACTTTCAGGTTGATTCTCAGGGTAACCTGAATATTGGTGGCCTTTTTAGTGTTACGTCGCAGGGGCAACTGACAATTCGTTACTCTAATCAGAATGTGGGGCTGGTGATCCGCAATGATAAAATTGAAGTTTATGACCAGAACGGACGCCTGGCTGTTCGCATAGGCAGGTTAAGCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
9903c6cf17560c1be4b0456810e929748349f0d2e76e6f52282f0e71e2e140e1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7493
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
E. coli prophages encode an arsenal of defense systems to protect against temperate phages Brenes,L.R. and Laub,M.T. 2025 — GenBank