Protein

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Genbank accession
AXH71328.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,74
Protein sequence
MGLISTSIPNLINGISQQNAVQRNVGQAELQSNFQSNVIEGLTKRPPTEFIANLLSTTAFPNNAAVHWINRDSDNQYVAIFTNGTVKVYNLQGQLQTLTIGTGGASYLGTTKPIEDLVFTNIADYTFVGNRSKTISETSTTTTAKVQEYISYVKSSQFGRQYSVTLNHSTWSYPIEVLFQMPTGNDASTDGKFRDTEKIANILLYGTGSTHWSSSADGIGFKTIRKDTGATLSTSQGLANYSGITGTFTHTQYGNTIHGTCSSGTFTVETTDGFGNQAMYAIKDSISDFTDLPYYAKPNMILQITGDEGDALSNYYVEFTSNGVWKECVGPGVKLGLDNSTMPFALINNNNGTFSFTQQTYTNRISGDEDTNSAPSFVGKKINNLTFFQNRLGIIADQNLVLSENAEYYNFYATTGTDVLDTDPIDIAAAGTTVNKLYNAIDFNEQLLLFSEESQYILESSGDAVTPTTAVLTKTSTFSHAKQVAPVSSGKYVYFTQNRNDKSSITEYFADDDTLTNDGIDVTIGVGSLIPKNVYKIVPNNIEDTLIILCHDDLDTTNNTAYTPDAPVTATNADTIIIYKYFWDANKKVQSAWSTWSLKDCQILSAQAYDSYVYILVNENFNTKLLRMDLRNPNFTGLTHNIHMDFRTSTLVGTYSSTTNLTSFTIPYSLNQTLKAVDATNGANLTIDSSSSGTLQKIKGNHTSAVFGASYLSEYKFSTPYIREESGGGTVSLTSGRYQIRQVSVDFQNTGFFKATVTQDGRSNVTYEFNGTVINNPTAVIGQPNITSGTYNIPIQSKNTNYTCTLKSDSHLPVHFVSAEIEGFYHRRSGRA
Physico‐chemical
properties
protein length:832 AA
molecular weight: 91180,72350 Da
isoelectric point:5,12258
aromaticity:0,10697
hydropathy:-0,32308

Domains

Domains [InterPro]
IPR058003
TTP
1–831
IPR058003
AXH71328.1
1 832
Architecture
TTP
TTP 1-831 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXH71328.1
1 832
Domain Start End Length (AA) Confidence
N-terminal 1 140 140 0,8874
Central domain 141 352 213 0,4387
C-terminal 353 832 479 0,4125
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-140
Central
141-352
C-terminal
353-832

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC120P
[NCBI] 		2283021 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidatus Pelagibacter sp. HTCC7211
[NCBI] 		439493 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXH71328.1 [NCBI]
Genbank nucleotide accession
MH598807 [NCBI]
CDS location
range 21306 -> 23804
strand +
CDS
ATGGGACTAATTTCAACATCAATTCCCAACCTTATTAATGGTATTAGTCAACAAAATGCTGTCCAACGTAATGTAGGACAAGCAGAATTACAATCTAATTTCCAATCTAATGTTATTGAAGGGTTGACCAAAAGACCTCCAACAGAATTTATCGCTAATCTTTTATCTACTACAGCGTTTCCAAATAACGCAGCAGTTCATTGGATTAACCGAGATAGTGACAATCAATACGTAGCAATTTTTACAAATGGAACAGTAAAAGTTTATAATTTACAAGGACAATTACAAACATTAACAATAGGTACTGGAGGTGCAAGTTATTTAGGCACAACAAAACCTATTGAAGATTTAGTATTTACAAACATTGCAGATTACACTTTTGTTGGAAACAGAAGCAAAACAATAAGTGAAACTTCAACAACAACAACTGCAAAAGTTCAAGAATATATTTCTTATGTTAAAAGTTCTCAATTTGGAAGACAGTACAGTGTTACTTTAAATCATTCTACTTGGTCATATCCAATAGAAGTTTTGTTTCAAATGCCTACTGGTAATGATGCTTCAACAGATGGTAAATTTAGAGATACAGAAAAAATTGCAAACATATTATTATATGGAACTGGGTCTACTCATTGGTCTAGCAGTGCAGATGGTATAGGTTTTAAAACAATTAGAAAAGATACTGGTGCTACTTTAAGTACATCACAAGGTTTAGCAAATTATTCGGGAATTACTGGAACGTTTACACATACTCAGTATGGTAATACTATTCACGGTACATGTAGTAGTGGTACGTTTACAGTAGAAACTACAGATGGTTTCGGTAACCAAGCCATGTATGCAATAAAAGATAGCATAAGTGATTTTACTGATTTACCATATTACGCAAAACCTAATATGATACTTCAAATCACTGGTGATGAAGGTGATGCACTTTCTAATTATTATGTTGAATTTACAAGTAATGGTGTTTGGAAAGAATGCGTTGGCCCAGGAGTAAAATTAGGTTTAGATAATTCTACAATGCCTTTTGCATTAATTAATAACAACAACGGTACATTTAGTTTTACACAACAAACATACACAAATAGAATAAGTGGTGATGAAGACACAAATTCTGCACCAAGTTTTGTAGGAAAAAAAATTAATAATTTAACATTTTTTCAAAACAGATTAGGAATAATTGCAGACCAAAATTTAGTTTTATCTGAAAACGCAGAATATTATAATTTTTACGCAACAACTGGAACAGATGTTTTAGACACTGACCCTATTGATATTGCCGCAGCGGGAACTACAGTTAATAAACTTTACAATGCTATAGATTTTAATGAACAACTTTTATTATTTTCAGAAGAATCTCAATATATTTTAGAAAGTTCTGGAGACGCTGTAACACCTACAACAGCAGTGTTAACTAAAACAAGTACGTTTTCTCATGCAAAACAAGTTGCTCCAGTTTCGTCAGGTAAATATGTTTATTTTACACAAAATAGAAATGACAAAAGTTCAATCACAGAATATTTTGCAGATGATGATACTTTAACTAATGATGGAATAGATGTAACTATAGGTGTAGGTTCGTTGATACCTAAAAATGTATATAAAATTGTACCTAACAATATTGAAGATACATTAATTATATTATGTCATGATGATTTAGATACTACTAACAATACTGCATACACGCCTGATGCTCCTGTAACTGCTACAAATGCAGATACAATAATTATTTATAAATATTTTTGGGATGCTAATAAAAAAGTACAATCAGCTTGGAGTACGTGGAGTTTAAAAGATTGTCAAATTTTATCAGCACAAGCATATGATAGTTATGTTTATATTTTAGTTAATGAAAATTTTAATACAAAATTATTAAGAATGGATTTACGTAATCCAAATTTTACTGGACTAACACATAATATTCACATGGATTTTAGAACATCTACATTAGTTGGTACTTATAGTTCTACTACAAATTTAACAAGTTTTACAATACCTTATAGTTTAAATCAGACATTAAAAGCAGTAGACGCAACTAATGGTGCTAATTTAACAATAGATAGTTCTAGTTCTGGAACTTTACAAAAAATTAAAGGTAACCACACTTCAGCAGTTTTTGGGGCATCGTATTTATCAGAATATAAATTTTCTACTCCATATATAAGAGAAGAGTCTGGTGGAGGAACTGTGTCATTAACATCGGGACGTTATCAAATAAGACAAGTTTCTGTTGATTTTCAAAACACTGGTTTTTTTAAAGCTACAGTAACTCAAGATGGAAGAAGTAATGTAACATATGAATTTAATGGTACTGTAATTAACAACCCAACTGCTGTTATTGGACAACCTAATATAACAAGCGGTACTTATAATATTCCTATTCAATCTAAAAATACAAACTACACATGTACGTTAAAGTCAGATTCACATTTACCAGTTCATTTTGTTTCTGCTGAAATTGAAGGATTTTATCATAGACGTTCTGGAAGGGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
358d81e1f89bcde037db53379245b70eaac2f31db10202f54f9217acb13e5a4c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8887
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50